Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq513 100 2e-16 >seq513 Length=239887 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||| |||||||| || || || || | || || || |||||||| ||| ||| | Sbjct 208070 AAATATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACCATTACATTAGAAGTTGAATC 208129 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 | || ||| | | || |||||||||| ||| ||||| || || | ||| ||| Sbjct 208130 CACTGATACGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCCCCAGA 208189 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 ||||| | ||||| || || ||||| ||||| |||||| | ||| | || || Sbjct 208190 CCAACAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTTAGACTA 208249 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||||||||||| ||||||||||| ||| |||| Sbjct 208250 TAACATTCAAAAGGAATCTACTCTTCACTTGGT 208282 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || ||||| | || || ||||| ||||| ||| ||| || | Sbjct 208302 ATGCAGATTTTCGTCAAAACTCTTACTGGCAAAACTATTACGTTAGAAGTTGAATCTACC 208361 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || | | | | || |||||||||| ||| ||||| || || | ||| ||| ||| Sbjct 208362 GATATGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 208421 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||| || || ||||| ||||| |||||| | ||| | | || || || Sbjct 208422 CAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTCAGACTACAAT 208481 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || || || ||||||||||| || ||||| Sbjct 208482 ATCCAGAAGGAATCTACTCTTCATTTGGTA 208511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425323728081423