Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq15377 132 4e-26 seq513 129 5e-25 seq7507 125 6e-24 seq2291 114 1e-20 seq802 104 2e-17 >seq15377 Length=116332 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || || ||||| || || | || |||||| | || Sbjct 81070 ATGCAAATTTTCGTCAAGACACTTACTGGCAAAACCATCACTTTGGAGGTAGAATCATCC 81129 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | | || | || || ||||||||||||||||||||||| || ||||| || || Sbjct 81130 GACAGAATTGATAATGTCAAGCAAAAGATCCAAGACAAAGAAGGTATTCCTCCAGACCAG 81189 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||||||||| ||||| | || || | | ||||||| || ||| Sbjct 81190 CAACGTTTGATCTTTGCCGGTAAACAATTAGAAGACGGGCGCTCGTTGTCAGACTACAAC 81249 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| |||||||| || || || Sbjct 81250 ATTCAGAAGGAATCAACGCTTCA 81272 >seq513 Length=239887 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || || || || || || ||||| | ||||| ||| |||| Sbjct 208074 ATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACCATTACATTAGAAGTTGAATCCACT 208133 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||||||||| ||||| || || || || ||| Sbjct 208134 GATACGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAA 208193 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || ||||| || || | || ||| | | | | ||| |||||| Sbjct 208194 CAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTTAGACTATAAC 208253 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||||||||| || || |||||||| Sbjct 208254 ATTCAAAAGGAATCTACTCTTCACTTGGT 208282 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || |||||||||||| | ||||| ||| | ||| Sbjct 208302 ATGCAGATTTTCGTCAAAACTCTTACTGGCAAAACTATTACGTTAGAAGTTGAATCTACC 208361 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | | || | || || ||||||||||||||||| ||||| || || || || ||| Sbjct 208362 GATATGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 208421 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || ||||| || || | || ||| | | | ||||| || || Sbjct 208422 CAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTCAGACTACAAT 208481 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || || ||||| Sbjct 208482 ATCCAGAAGGAATCTACTCTTCATTTGGT 208510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || |||||||||||||| | ||||| ||| | ||| Sbjct 203108 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTAGAAGTTGAATCTACC 203167 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | | || | || || ||||| || ||||| || ||||| || || || || ||| Sbjct 203168 GATATGATTGATAATGTCAAGCAAAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCAA 203227 Query 24824 CAACGTTTGATCTTTGCCGGGAAACA 24849 |||||| | || || ||||| || || Sbjct 203228 CAACGTCTTATTTTCGCCGGCAAGCA 203253 >seq7507 Length=243275 Score = 125 bits (138), Expect = 6e-24 Identities = 1176/1887 (62%), Gaps = 75/1887 (4%) Strand=Plus/Plus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 || ||| || ||||| || |||||||| | || || || | ||||||||||| || Sbjct 202810 TTGATCCACGGTAAATTTGATGGCATCGACAGCAGGGCGAGTGCGAAGATAATACATACC 202869 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 || || || || |||| ||| | || | ||| || ||| | | | || | || Sbjct 202870 AGTCTTCAAACCCTTTTGCCAACCATAAAAGTGCATACTAGTTAATTTGCCAAAATTAGG 202929 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 | | | ||| ||||| | ||||||||||||||| ||||| || |||||| || Sbjct 202930 CTCTCCAATAAAGATGTTCAGACTTTGACTCTGATCGATAAAAGCACCACGATCAGCAGC 202989 Query 138333 CATGTTAATTAAATTTTTACTTT---TCATCTCCCACACGGTCTTGTATAGATCACGAAT 138389 ||| | || || | || | ||| |||||| || || || || | || | Sbjct 202990 CATATCAACCAAGGT---ACGCTGGCTCAGCTCCCAGACAGTTTTATACATGTCCTTCAA 203046 Query 138390 ATGTCGCGGTATTGTTGCAATATTTTGAAT---GCTCCCGTTGGCCGCAATGATGCGATT 138446 | | | || || | || ||||| || || || | | | || ||| || Sbjct 203047 CTTTTGAGGGATGCCAGGGATGTTTTGGATAGAGCCACCATCAGACATGATCATG---TT 203103 Query 138447 TCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTAT 138506 | ||||| ||||| | ||| || | || ||| || || | || | ||||| Sbjct 203104 CTTGATGTCCTCGTTCCAAAGACCCATTTCGACCAAATCCTTCAGCAACCAAGGGTTTAC 203163 Query 138507 GACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAA 138566 | || |||||||| || | || || || || | ||| ||| | |||||||| Sbjct 203164 AATTTGGAATTCACCAGCAAGAACACGTCGGGTATACAAGTTTGATGTGTAGGGCTCAAA 203223 Query 138567 CGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAG 138626 |||||||| |||| || |||| || | || || ||||| || | ||| || Sbjct 203224 GCATTCGTTGAAGCCCATGATTTGAGAGGTTGAGGCAGTAGGCATAGGAGCAAGCAAGAG 203283 Query 138627 AGAATTCCGTAAACCGTGAAGCTTG--ATTCGTTCCTTGAGCGACGACCAGTCCCACAAA 138684 || || || | |||||| ||| || ||| || | || | ||| ||||| | | Sbjct 203284 GGAGTTACGGACGCCGTGAT--TTGCAATCTTTTCTTTCAAGGATGCCCAATCCCAAAGA 203341 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACT 138740 ||||| | |||||||| ||||| || | || || |||| ||||| Sbjct 203342 GAAGTAGGTGTGACATTCCACATGTCGTATTGCAGAATGCCTTGGGAAACA----GGACT 203397 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800 ||||| || | || || ||||| | || || | || || || || || || Sbjct 203398 ACCTTCATATGTCTCATACGGGCCAAATTGCTGAGCGAGTTCATTAGAAGCTTCCAGGGC 203457 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC-GGCGCTCTCGT 138859 | ||| ||| || |||||| |||||| ||| ||| |||||| |||| ||| Sbjct 203458 AGCATGGTAGATTGTTTCGAAAATCTGAATATTCAGCTGCTTGGCCTCAGGCGAG-TCGA 203516 Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919 | | | | || | | || || || |||| ||||| || |||| || | ||| | Sbjct 203517 AAGCAAACTTCATCAGCATAAAAGCATCAGCCAAGCCTTGAACACCCAAACCAATAGGAC 203576 Query 138920 GATGGCGCAGATTTGA-CGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATT 138978 |||| | | || || |||| | || | | | |||||||||||| |||||||| || Sbjct 203577 GATGTCTCTTGTTGGAGCGCTCT-GCTTCAACCACAGGATAATAGTTGACATCGATAATC 203635 Query 138979 TTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCA-AAATCGTATGT 139037 ||||| ||||| || |||||||| || | | || | || ||||||||| | Sbjct 203636 TTGTTCAAATTCTTGGTGATGACCTTAGTGACAT-CATGAAGCTTTTGGAAATCGTATCT 203694 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 | | | |||| || ||| | | | ||| | ||||| | || || Sbjct 203695 CTCTCTAT------CGACAACA-----AAAGAGGGTAAGGCAA-TGGAGGCCAGATTACA 203742 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 || || |||||||| ||| | ||||| || ||||| | ||| | ||||||||||| Sbjct 203743 GACGGCTACTTCGTCAGGGCTGGAATATTCAACGATTTCAGTACAAAGGTTACTACACTT 203802 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 ||| ||||| | ||| ||||| ||||| |||| || |||||||| || || ||||| | Sbjct 203803 GATAGTACCCAGATTCTGTTGGTTGCTCTTTCTATTGCAAGCATCCTTATAGAGCATGAA 203862 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA-------GTCCCTAG 139270 || | || ||||| ||| | ||| | ||| | | ||| || ||| | Sbjct 203863 AGGATTACCGGTTTCAGTTTGAGCCTCCAAGATGGCAT--ACCAAAGCTTTTGTGCCTTG 203920 Query 139271 CTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTA-GAGTTCGTCGAAT 139329 | || | | || | | || ||||| |||| ||| | || || | |||| Sbjct 203921 ATGGTTTCTCTAGCTC-----TGCCTTCACGCTCATACTGTTCAAACAAGGTC-TTGAAT 203974 Query 139330 CGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACG 139389 || || | | ||| | || | || || || ||||| | ||| ||||| | Sbjct 203975 TCATCGCCCCACACTTCACATAGGCCAGGAGCCTCGTTGGGACAGAAGAGAGACCACTCA 204034 Query 139390 CCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCG 139449 ||||| | |||| ||| ||| || ||||| || | ||| | ||| | | ||||||| Sbjct 204035 CCGTTATCTCTGACTCGCTCCATAAAGAGATCAGGCACCCAAAGAGCATAAAACAAATCG 204094 Query 139450 CGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGT 139507 || || | | || ||| ||| | ||| || | | | ||||| || | | Sbjct 204095 CGGGCTCTAATTTCGTCCTTACCAAAGTT--TTTGCGGAGATCCAGGAACATGAATATAT 204152 Query 139508 CAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGAT 139564 |||| ||||| ||||||||||| ||||| | ||||| || || |||||||||| Sbjct 204153 CAGCATGCCAGGGTTCCAGATACATGGCGAAAGCGCCAGGACGCTTATTACCACCTTGAT 204212 Query 139565 CGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTC 139624 |||| | || | | || || || || |||| ||| ||| || || | | | Sbjct 204213 CGACATAGCGGGCCGTGTTGTTAAACACACGCAGCATGGGCAAGAGGCCATTAGAGTAGC 204272 Query 139625 CGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGA 139681 ||||||| | | ||| | || | ||| ||||| | || | ||| | ||||| Sbjct 204273 CGTTGGTACCAGCAATGTAAGAACCAGT---AGCACGGACATTGTGAATATTCAAGCCGA 204329 Query 139682 TTCCGCC-GCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCT 139739 | || || ||| ||| || ||| | | || ||| | | || ||||| |||||| Sbjct 204330 TGCCACCAGCCGTCTTT-GAAATTTGAGCACAGATCTTG-AGGGTTTCGTAGATACCTTC 204387 Query 139740 TATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCC 139799 || ||| || | ||| || | || || || || || ||||| || | ||||| Sbjct 204388 GATCGAGTCCTCTTTCATGGTCAACAAGAAACAAGAGGACAGTTGTGGGCGAGGAGTGCC 204447 Query 139800 GGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGT 139859 || |||| || ||||| || || ||||| | | ||||| | | |||||| Sbjct 204448 AGCATTGAACAAGGTGGGACTGGCATGTGTGAAATAACGCTCTGACATTAGGTTGTACGT 204507 Query 139860 TTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919 ||| ||||| | ||||| || |||||||| |||| ||| ||||| | || ||| Sbjct 204508 TTCTATGGCAGCGTCGATATCTTGGCCATGGATACCAACAGCGACACGCATGATCAAATG 204567 Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTT 139979 || | ||||| || | |||||||| || || | ||| | ||||| Sbjct 204568 CTGAGGTCTCTCGGCTACTTTGGAGTCGATTTTGAGCAAGTACGAGCGCTCCAATGTCTT 204627 Query 139980 GTAGCCAAAGTACCTATAGTTGAAATC 140006 | |||||||| | | || |||||||| Sbjct 204628 GAAGCCAAAGAAATTGTACTTGAAATC 204654 >seq2291 Length=180 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || || ||||| || || | || |||||| | || Sbjct 2 ATGCAAATTTTCGTCAAGACACTTACTGGCAAAACCATCACTTTGGAGGTAGAATCATCC 61 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | | || | || || ||||||||||||||||||||||| || ||||| || || Sbjct 62 GACAGAATTGATAATGTCAAGCAAAAGATCCAAGACAAAGAAGGTATTCCTCCAGACCAG 121 Query 24824 CAACGTTTGATCTTTGCCGGGAAACA 24849 |||||||||||||||||||| ||||| Sbjct 122 CAACGTTTGATCTTTGCCGGTAAACA 147 >seq802 Length=2293163 Score = 104 bits (114), Expect = 2e-17 Identities = 325/494 (66%), Gaps = 12/494 (2%) Strand=Plus/Plus Query 138156 ATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGT 138215 ||| |||||||| || |||||||| |||| ||| | | || ||||||||||| ||||| Sbjct 2025006 ATCGACAGTAAATTTGATGGCATCGACGGCAGGTCTTGATCGAAGATAATACATGCCCGT 2025065 Query 138216 TTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCGGTT 138274 || || || |||| ||||||||| | || || || ||||| | || ||| ||| || | Sbjct 2025066 CTTCAATCCCTTTTTCCAGGCGTAGAAATGCATGGACGTGAGCTTAC-CGT-AGTTGGGT 2025123 Query 138275 TCGCCAGA-AATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 || |||| || | ||| | || || ||| || || || || ||| |||| ||| Sbjct 2025124 TCAGCAGAGAACAAGTTCATAGACTGCGACTGGTCAATAAACGCAGCTCTATCAGCAGCC 2025183 Query 138334 ATGTTAATTAAATTTTTACTTT---TCATCTCCCACACGGTCTTGTATAGATCACGAATA 138390 |||| || | | | | | |||||||| || |||||||| || | | Sbjct 2025184 ATGTCGATGA---TGGTGCGCTGAGAGATCTCCCAGACCGTCTTGTAGAGCCTTTTTAAA 2025240 Query 138391 TGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTC 138450 | ||| || | | ||| | || || || ||| | |||||| || || || Sbjct 2025241 TCATCCGGGATGTTGGGAATCTCCTGGATACTGCCGCCGTGCGCAATCATCATGTTCTTC 2025300 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATGAC 138509 | | || || ||||| || ||||| |||| ||||| | ||| ||| || | || Sbjct 2025301 ACATTGTCATTCCACAGACCCAGCTTGA-CAAGATCGTTCAACAGGTATTGATTGACTAC 2025359 Query 138510 CTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGA 138569 || |||||||| || || || ||| || ||| | ||| |||| ||||| | Sbjct 2025360 TTGGAATTCACCACTTTGAACACGGCGTGTGTATATATTGCTAGTGTAAGGTTCAAAGCA 2025419 Query 138570 TTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGA 138629 ||| ||||| ||||| ||||| ||| | ||||| ||||| |||| | |||||| Sbjct 2025420 TTCATTGTTGCCCAGGATCTGGCTGGTGCTGGCGGTAGGCATAGGGGCCAGAAGAAGAGA 2025479 Query 138630 ATTCCGTAAACCGT 138643 || || | |||| Sbjct 2025480 GTTACGGATGCCGT 2025493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449809661890360