Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq513 113 3e-20 seq15377 84.2 1e-11 >seq513 Length=239887 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||||| |||||||||||||| | || | || |||| Sbjct 208285 AGAACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCTAAAAGAGTACGACCATCT 208226 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | |||||| |||||||| || || ||||| |||||| | || | || |||||||| Sbjct 208225 TCTAATTGCTTGCCGGCGAAAATAAGACGTTGTTGGTCTGGGGGAATACCTTCCTTGTCT 208166 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||||| ||||| | |||| ||| ||| || || || | || |||||| Sbjct 208165 TGGATCTTTTGCTTGACATTATCAATCGTATCAGTGGATTCAACTTCTAATGTAATGGTC 208106 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || ||||| ||||| Sbjct 208105 TTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 208074 >seq15377 Length=116332 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/195 (70%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || | |||| | || || | ||| || ||||| ||| Sbjct 81260 TCCTTCTGAATGTTGTAGTCTGACAACGAGCGCCCGTCTTCTAATTGTTTACCGGCAAAG 81201 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || || ||||| | || ||||| ||||| || Sbjct 81200 ATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCTTGGATCTTTTGCTTGAC--AT 81143 Query 34907 GCTATCGATTCATT----GGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 |||| |||| | | || || || | || ||||| || || || || ||||| Sbjct 81142 --TATCAATTCTGTCGGATGATTCTACCTCCAAAGTGATGGTTTTGCCAGTAAGTGTCTT 81085 Query 34963 TACAAAGATCTGCAT 34977 || || || ||||| Sbjct 81084 GACGAAAATTTGCAT 81070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325630730789303