Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq513 107 3e-18 seq15377 100 4e-16 seq2291 84.2 3e-11 >seq513 Length=239887 Score = 107 bits (118), Expect = 3e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| | || || ||||| ||||| | || || ||| || || Sbjct 208303 TGCAGATTTTCGTCAAAACTCTTACTGGCAAAACTATTACGTTAGAAGTTGAATCTACCG 208362 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| ||| | ||||| || | || || ||| || ||||||||||| || || |||| Sbjct 208363 ATATGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAAC 208422 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || ||||| || || || |||||||| ||| | | || | |||| || |||| Sbjct 208423 AACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTCAGACTACAATA 208482 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATA 146263 | || || ||||| ||| | ||||| ||| | || | | || ||| |||| Sbjct 208483 TCCAGAAGGAATCTACTCTTCATTTGGTACTTCGTCTTCGTGGTGGTCAATA 208534 >seq15377 Length=116332 Score = 100 bits (110), Expect = 4e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | || ||| | || || ||||| || ||| | || |||||| ||| | Sbjct 81071 TGCAAATTTTCGTCAAGACACTTACTGGCAAAACCATCACTTTGGAGGTAGAATCATC-C 81129 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || | ||| | ||||| || | || || ||| |||||||| ||||| || || || Sbjct 81130 GACAGAATTGATAATGTCAAGCAAAAGATCCAAGACAAAGAAGGTATTCCTCCAGACCAG 81189 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | || ||||| |||||||||||||| || | |||| |||| || || Sbjct 81190 CAACGTTTGATCTTTGCCGGTAAACAATTAGAAGACGGGCGCTCGTTGTCAGACTACAAC 81249 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || || ||||| || | ||| |||| | || ||||||| |||| Sbjct 81250 ATTCAGAAGGAATCAACGCTTCATCTAGTGCTTCGTCTAAGAGGTGGTA 81298 >seq2291 Length=180 Score = 84.2 bits (92), Expect = 3e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | || ||| | || || ||||| || ||| | || |||||| ||| | Sbjct 3 TGCAAATTTTCGTCAAGACACTTACTGGCAAAACCATCACTTTGGAGGTAGAATCATC-C 61 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || | ||| | ||||| || | || || ||| |||||||| ||||| || || || Sbjct 62 GACAGAATTGATAATGTCAAGCAAAAGATCCAAGACAAAGAAGGTATTCCTCCAGACCAG 121 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 ||| | | || ||||| |||||||||||||| || Sbjct 122 CAACGTTTGATCTTTGCCGGTAAACAATTAGAAGA 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786012733950040