Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq8594 82.4 1e-10 seq3986 82.4 1e-10 >seq8594 Length=211578 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 211257 TTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 211198 Query 8717 CCCCGACG 8724 ||||| || Sbjct 211197 CCCCGCCG 211190 >seq3986 Length=322 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 60 TTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 119 Query 8717 CCCCGACG 8724 ||||| || Sbjct 120 CCCCGCCG 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652717193323280