Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq15377 113 3e-20 seq2291 89.7 3e-13 >seq15377 Length=116332 Score = 113 bits (124), Expect = 3e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | ||| | ||| || || || || || |||||||| || || Sbjct 81297 ACCACCTCTTAGACGAAGCACTAGATGAAGCGTTGATTCCTTCTGAATGTTGTAGTCTGA 81238 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | | ||| |||| || |||||||| |||||||| |||||||| ||||| ||| | || Sbjct 81237 CAACGAGCGCCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGAGG 81178 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || || || |||| || | ||||| |||||| | Sbjct 81177 AATACCTTCTTTGTCTTGGATCTTTTGCTT-GACATTATCAATTCTGTCGGATGATTCTA 81119 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 | || | ||||| ||||| || || | || || || || || |||||| ||| Sbjct 81118 CCTCCAAAGTGATGGTTTTGCCAGTAAGTGTCTTGACGAAAATTTGCATATTTG 81065 >seq2291 Length=180 Score = 89.7 bits (98), Expect = 3e-13 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| || || | | ||| |||| || |||||||| |||||||| |||||||| ||| Sbjct 180 TTGTAGTCTGACAACGAGCGCCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGC 121 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | |||||||||||| || || || || |||| || | |||| Sbjct 120 TGGTCTGGAGGAATACCTTCTTTGTCTTGGATCTTTTGCTT-GACATTATCAATTCTGTC 62 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||| || || | ||||| ||||| || || | || || || || || ||||| Sbjct 61 GGATGATTCTACCTCCAAAGTGATGGTTTTGCCAGTAAGTGTCTTGACGAAAATTTGCAT 2 Query 33750 A 33750 | Sbjct 1 A 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328641356927040