Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq513 109 1e-18 seq15377 100 7e-16 >seq513 Length=239887 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || ||||| || || || ||||| ||| | | || Sbjct 208305 CAGATTTTCGTCAAAACTCTTACTGGCAAAACTATTACGTTAGAAGTTGAATCTACCGAT 208364 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | || || ||||||||||| ||||| || ||||| ||| || ||| ||| Sbjct 208365 ATGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAACAA 208424 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||| |||||||| ||||| || |||||||| | ||| | | || ||||| || Sbjct 208425 CGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTCAGACTACAATATC 208484 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 ||||| || ||||||||||| Sbjct 208485 CAGAAGGAATCTACTCTTCA 208504 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || || || ||||| ||| |||| || | || Sbjct 208089 AAGACTCTTACTGGCAAGACCATTACATTAGAAGTTGAATCCACTGATACGATTGATAAT 208148 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||| ||||| || ||||| ||| || ||| ||| | ||||| ||| Sbjct 208149 GTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCCCCAGACCAACAACGTCTTATTTTC 208208 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| || |||||||| | ||| | || || ||| | || || || ||| Sbjct 208209 GCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTTAGACTATAACATTCAAAAGGAATCT 208268 Query 206365 ACTCTTCACCTTGTT 206379 ||||||||| | ||| Sbjct 208269 ACTCTTCACTTGGTT 208283 >seq15377 Length=116332 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || ||||| ||||||||||| || ||| || |||| | | || Sbjct 81084 CAAGACACTTACTGGCAAAACCATCACTTTGGAGGTAGAATCATCCGACAGAATTGATAA 81143 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||||| ||||| |||||||| ||| || ||| ||| | | ||||| Sbjct 81144 TGTCAAGCAAAAGATCCAAGACAAAGAAGGTATTCCTCCAGACCAGCAACGTTTGATCTT 81203 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| || || || ||||| || | | ||| | || |||||| | ||||| || || Sbjct 81204 TGCCGGTAAACAATTAGAAGACGGGCGCTCGTTGTCAGACTACAACATTCAGAAGGAATC 81263 Query 206364 TACTCTTCACCTTGT 206378 || ||||| || || Sbjct 81264 AACGCTTCATCTAGT 81278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181584023310677