Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq513 100 2e-16 >seq513 Length=239887 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315 ||| |||||||| || ||||| || | ||||||||||||||||| | ||| ||| | Sbjct 208070 AAATATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACCATTACATTAGAAGTTGAATC 208129 Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375 | ||| | ||| | || || ||||| || ||||| ||||| | ||| || Sbjct 208130 CACTGATACGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCCCCAGA 208189 Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435 |||||| | ||||||| || ||||| |||||||||||| | ||| | || || Sbjct 208190 CCAACAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTTAGACTA 208249 Query 106436 CAACATACAAAAAGAATCTACACTACATTTAGT 106468 ||||| ||||| |||||||| || || || || Sbjct 208250 TAACATTCAAAAGGAATCTACTCTTCACTTGGT 208282 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||| || ||||| | |||||||| || ||||| | ||| ||| | | Sbjct 208302 ATGCAGATTTTCGTCAAAACTCTTACTGGCAAAACTATTACGTTAGAAGTTGAATCTACC 208361 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| ||| | || || ||||| || ||||| |||||| | ||| || ||| Sbjct 208362 GATATGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 208421 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| || ||||| |||||||||||| | ||| | || ||||| Sbjct 208422 CAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTCAGACTACAAT 208481 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTA 106469 || || || |||||||| || ||||| ||| Sbjct 208482 ATCCAGAAGGAATCTACTCTTCATTTGGTA 208511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402252925659296