Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7507 145 9e-30 seq11881 116 5e-21 seq802 113 6e-20 >seq7507 Length=243275 Score = 145 bits (160), Expect = 9e-30 Identities = 864/1371 (63%), Gaps = 44/1371 (3%) Strand=Plus/Plus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| ||||||||||| || ||| |||| |||||| | || ||||| || ||||| Sbjct 203210 GTGTAGGGCTCAAAGCATTCGTTGAAGCCCATGATTTGAGAGGTTGAGGCAGTAGGCATA 203269 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGAGAGCGT 118311 || || | | ||| |||||||| || | ||| | ||| ||| || | | Sbjct 203270 GGAGCAAGCAAGAGGGAGTTACGGACGCCGTGATTTGC--AATCTTTTCTTTCAAGGATG 203327 Query 118312 CCCAGTCGTAGTT-GAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370 |||| || | || | || | | | |||||| || | || || || |||||| Sbjct 203328 CCCAATCCCAAAGAGAAGTAGGTGTGACATT-CCACATGTCGTATTGCAGAATGCCTTGG 203386 Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC----GGA 118426 || | || || ||| |||||||||| ||||| || || | ||| | | Sbjct 203387 GAAACAGGACTACCTTCATATGTCTCATACGGGCCAAATTGCTGAGCGAGTTCATTAGAA 203446 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 ||| || ||||| || || || |||||||| ||||| || ||||| |||||| Sbjct 203447 GCT----TCCAGGGCAGCATGGTAGATTGTTTCGAAAATCTGAATATTCAGCTGCTTGGC 203502 Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACAC 118545 ||| || || || || | | || || ||||| |||| || | ||||| |||| Sbjct 203503 CTCAGGCGAGTCGAAAGCAAA-CTTCATCAGCATAAAAGCATCAGCCAAGCCTTGAACAC 203561 Query 118546 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAAT 118605 | | ||||| || ||||||||| | || || | || |||| |||||| | | Sbjct 203562 CCAAACCAATAGGACGATGTCTCTTGTTGGAGCGCTCTGCTTCAACCACAGGATAATAGT 203621 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | |||||||| | | || | ||| ||||||| ||||| |||| ||||||||||||| Sbjct 203622 TGACATCGATAATCTTGTTCAAATTCTTGGTGATGACCTTAGTGACATCATGAAGCTTTT 203681 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA----GGAAGGGCGATTGACGCC 118721 | |||| | | ||||| || |||| || | || | ||| || || ||| Sbjct 203682 GGAAATCGTATC------TCTCTCTATCGACA-ACAAAAGAGGGTAAGGCAATGGAGGCC 203734 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTG---TACTCTATAATTTCCGTGCACAAG 118778 |||||||| || || | || | | || || || | ||||| || || | | Sbjct 203735 AGATTACAGAC---GGCTACTTCGTCAGGGCTGGAATATTCAACGATTTCAGTACAAAGG 203791 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || || ||| || || |||| |||| ||| || |||| | || || |||||||| Sbjct 203792 TTACTACACTTGATAGTACCCAGATTCTGTTGGTTGCTCTTTCTATTGCAAGCATCCTTA 203851 Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATC 118897 || |||||| | || | || || || ||||| | || | || || | ||| | | | Sbjct 203852 TAGAGCATGAAAGGATTACCGGTTTCAGTTTGAGCCTCCAAGATGGCATACCAAAGCTTT 203911 Query 118898 GGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTC 118957 | || | | || | | |||| || || ||| |||| | | | || | Sbjct 203912 TGTGCCTTG-ATGGTTTCTCTAGCTCTGCCTTCACGCTCATACTGTTCAAACAAGGTCTT 203970 Query 118958 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 119017 || || || ||| | || | || || || |||| | || |||||||||||||| Sbjct 203971 GAATTCATCGCCCCACACTTCACATAGGCCAGGAGCCTCGTTGGGACAGAAGAGAGACCA 204030 Query 119018 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 119077 | ||| || || |||| ||| ||||| || || | ||| || || | || | Sbjct 204031 CTCACCGTTATCTCTGACTCGCTCCATAAAGAGATCAGGCACCCAAAGAGCATAAAACAA 204090 Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG-- 119135 ||| || | | ||| || | || || || | |||| || |||| Sbjct 204091 ATCGCGGGCTCTAATTTCGTCCTTACCAAAGTTTTTGCGGAGATCCAGGAA---CATGAA 204147 Query 119136 -ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGC 119191 ||||| || ||||| |||||||| |||| |||| | || ||| | |||| | Sbjct 204148 TATATCAGCATGCCAGGGTTCCAGATACATGGCGAAAGCGCCAGGACGCTTATTACCACC 204207 Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251 || | ||||| | || ||| |||||| ||||| ||||| || | || |||| || Sbjct 204208 TTGATCGACATAGCGGGCCGTGTTGTTAAACACACGCAGCATGGGCAAGAGGCCATTAGA 204267 Query 119252 TTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACC 119311 | ||| || || || ||| ||| | | || | ||||| ||| || | || || Sbjct 204268 GTAGCCGTTGGTACCAGCAATGTAAGAACCAGTAGCACGGACATTGTGAATATTCAAGCC 204327 Query 119312 AATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATC 119371 || || || ||| |||||| ||||| || || | |||| | ||||||| || || Sbjct 204328 GATGCCACCAGCCGTCTTTGAAATTTGAGCACAGATCTTGAGGGTTTCGTAGATACCTTC 204387 Query 119372 GATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACC 119431 ||||||||| | || | | | | ||| || |||| ||| || | || || || Sbjct 204388 GATCGAGTCCTCTTTCATGGTCAACAAGAAACAAGAGGACAGTTGTGGGCGAGGAGTGCC 204447 Query 119432 AGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGT 119491 ||| ||||| | || || | || || |||| || | ||||| || ||| || Sbjct 204448 AGCATTGAACAAGGTGGGACTGGCATGTGTGAAATAACGCTCTGACATTAGGTTGTACGT 204507 Query 119492 CTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 || | | | ||| || |||| || || ||||| | | ||| ||||| Sbjct 204508 TTCTATGGCAGCGTCGATATCTTGGCCATGGATACCAACAGCGACACGCAT 204558 >seq11881 Length=132943 Score = 116 bits (128), Expect = 5e-21 Identities = 191/274 (70%), Gaps = 5/274 (2%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || || || ||||||||||| ||||| | |||||| || ||| || || Sbjct 44836 GGCAAAGTCGGTATGAAGGCCCTCGTCACGAGAGATCAATTCATTAGAAAAGGTCAACCC 44895 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||||| || |||||||| | ||||||||| | ||||||||| ||||||||||| Sbjct 44896 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAAATGGAGGCAAATGAGCCTGAGAAGAAGAT 44955 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTG-TATCAA 130193 || || || || || |||| | | |||||||| || | ||| | | Sbjct 44956 ACCTTCGACGGCAGCAAAAGCAACTAATCTTTCAGCAAAAGA----ATCATTGCCAGAGA 45011 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 ||| || | ||||| | |||||| ||| |||||| |||| ||| | || || |||| Sbjct 45012 TCCATTTGAAGGCCCAGTCAGCCTTTCTCTTGATACAGGGGATGGTTTCAATGGCGTCAA 45071 Query 130254 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTA 130287 |||| || |||||| | ||| ||||| || Sbjct 45072 AGAGCATCTCCTTTTCAGCGCTATCCTTGATATA 45105 >seq802 Length=2293163 Score = 113 bits (124), Expect = 6e-20 Identities = 301/451 (67%), Gaps = 17/451 (4%) Strand=Plus/Plus Query 119117 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 119176 ||| ||||||||||| | || |||| | ||||| || |||||||||| || | || Sbjct 2026523 CAATTCCAAAAAGTCAAAGACATCCACATGCCAAGGCTCCAGGTACATGGCAAAGTTACC 2026582 Query 119177 CTTACGA---CGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCAT 119233 ||||| | || |||| | ||| | | ||| ||| |||| || || || ||||| Sbjct 2026583 ATTACGTTTTCCGCCGCCCTGCGTGACAAAACGCGCCGTGTCGTTGAACACGCGCAGCAT 2026642 Query 119234 TGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTG 119291 |||| |||||| | ||| |||||| || || ||| | ||| || | | | | | Sbjct 2026643 AGGAACGATACCGTTGGAGGTGCCATTCGTGCCAGCAATGTAGGAGCCTGA--GCCACGG 2026700 Query 119292 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 119351 | | || | | | || | ||| || || ||| || || | || || ||| Sbjct 2026701 ATCTTTTGAAAGGCAACGCCGACACCGCCCGCGGCCTTGGATATACGTGCACAGGTCGTC 2026760 Query 119352 AGACTGCCGTAGATCCCATCGATCGAGTCACC-CTTATTTGCGATGAGGAAGCAGCTCGA 119410 || | ||||||| || || || |||| | | ||||| || |||||||||||||| Sbjct 2026761 AGCGTATCGTAGATGCCCTCAATACTGTCATCGCGCATTTG-GACAAGGAAGCAGCTCGA 2026819 Query 119411 CATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACC 119470 || |||||| |||| || ||||||||||| ||||| || || || || | || |||| Sbjct 2026820 CAGTTGAGGTTTGGGCGTGCCAGCGTTGAACAGAGTGGGCGTGGCATGCGT-AAAATACT 2026878 Query 119471 TTG-GGACATCTTGTCGTAGGTCTCCAAGACG---GCGGGAATGTCTTCCCCGTGAATAC 119526 | | |||||| |||||||||| ||| || || || || | ||||| || | Sbjct 2026879 TGGAGGACATGAGATCGTAGGTCTTAAAGGCGCTCTCGAGA---TCAGCGCCGTGGATGC 2026935 Query 119527 CGATCGAGACCCGCATAAACATGTATTGGGG 119557 | | | || ||||||| |||||| || || Sbjct 2026936 CCAGAGCCACACGCATAATCATGTACTGAGG 2026966 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 118562 ATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCT 118621 ||||||||||||| | || || ||| || || || |||| ||| || || | Sbjct 2025844 ATGTCTCATATTACTTGTGCGTGCTTCCTCTACAGGGTAGTAATTGACATCAATGACTTT 2025903 Query 118622 ATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCG 118681 || | ||||| ||||||||||| | | ||||||||| || || | ||||| | Sbjct 2025904 GTTCAAGTTTTTCGTGACAACCTTGGCAACTTCATGAAGTTTCTCAAAGTCAAACGTCTT 2025963 Query 118682 AGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 118741 || ||| ||| ||| |||| || || || | || ||||||||||| |||| ||| Sbjct 2025964 GGTTTCTGCATCAACAAACTTGGGCAGAGCAAGCGAAGCCAGATTACAAACAGCCACCTC 2026023 Query 118742 ATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAA 118801 || | || || || || || || || |||| ||| || |||||||||| Sbjct 2026024 GTCAGGAGATGTATATTCAATGATCTCTGTACACAGGTTGGATGAGGAGATGGTGCCCAG 2026083 Query 118802 GTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 |||||||||||||||||| || || ||||| Sbjct 2026084 ATTCTTTTGATTTGACTTTTCATTGCAGGCATC 2026116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618314319109720