Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq11881 253 2e-62 seq14752 251 6e-62 >seq11881 Length=132943 Score = 253 bits (280), Expect = 2e-62 Identities = 605/903 (67%), Gaps = 20/903 (2%) Strand=Plus/Plus Query 4200 AGTTAAAAGTCCACGTCTAGAGTAAACGTCATATC----GGACT-TTGAACA-AACACCA 4253 ||||| ||||| | || |||||||| ||| | || || | ||| || ||| ||| Sbjct 44480 AGTTAGAAGTCGGCATCCAGAGTAAAAGTCTTTTCAACAGGTGTCTTGTTCATAACGCCA 44539 Query 4254 AATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATA 4313 ||| || || || || || || || |||||||| || || |||| | |||||| Sbjct 44540 GCGCGTTGATAGTCAGAGACACGTTTCTCAAAGAAATTGGTCTTTCCTTGAAGCGAAATC 44599 Query 4314 TTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACA 4373 | ||||| |||||||| || |||| || |||||| ||| || | || || || Sbjct 44600 ATGTCCATGAAATCAAAGGGGTTAGAGGCATTGTAAATTTTATCGAAGCCGAGGGCGACC 44659 Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 | | || |||||| |||||||| || || |||| |||||| | | ||| || ||||| Sbjct 44660 ATGAGTCTGTCAGCAACAAATTCAATGTATTGGCACATGAGGTTGGCGTTCATGCCAATA 44719 Query 4434 AATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 | | ||||| | |||| ||||| || ||||| || || || || |||| ||| Sbjct 44720 AGATTAACAGGCAAAGCGTCAGTCAAGAATTCTTGCTCAATTTCAACAGCCTCTGCGATG 44779 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAG-TATCCAAACAATAAACACGC 4552 || |||| |||| || || | ||| | || | |||||| | ||| || Sbjct 44780 ATGCTCTTTACACGCTCTTGGGAGGGGGT-TTTCTTCAGATGGGTAAACAAGAGACAGGC 44838 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||| || ||| | || ||||| | |||| ||| |||||||| || || || || Sbjct 44839 AAAGTCGGTATGAAGGCCCTCGTCACGAGAGATCAATTCATTAGAAAAGGTCAACCCAGG 44898 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | || | ||| || ||||| || || | ||||||||| || || ||||| || || Sbjct 44899 CATGAGGCCGCGCTTCTTGAGCCAGAAAATGGAGGCAAATGAGCCTGAGAAGAAGATACC 44958 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCA 4732 ||| ||||| ||||| || ||||||| | || || | ||| | ||||| Sbjct 44959 TTCGACGGCAGCAAAAGCAACTAATCTTTCAGCAAAAGAAT---CATTGCCAGAGATCCA 45015 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA- 4791 ||| || ||||||| ||| ||| |||| | || || || || | || |||| ||| | Sbjct 45016 TTTGAAGGCCCAGTCAGCCTTTCTCTTGATACAGGGGATGGTTTCAATGGCGTCAAAGAG 45075 Query 4792 -ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 || | ||||| || || | ||||||||||| || | || || || | ||| Sbjct 45076 CATCTCCTTTT--CAGCGCTATCCTTGATATAAGTGTCAATCAAAAGACTGTATGTCTCA 45133 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA-CTTG 4909 | ||| || ||||| || || || || || || || || ||| | ||||| | | |||| Sbjct 45134 GCATGAATGTTTTCAATGGCGATTTGGAAACCATAGAAACATTTGGCTTCAGGAATCTTG 45193 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 ||||| | |||||| ||| || | |||||||||||| | ||| ||| ||||| Sbjct 45194 -ACTTCATCACAAAAGTTTTGCACCAGGTTTTCGTTTACAACACCATCAGCACTAGCAAA 45252 Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTCCAGTG 5026 |||||||| ||| |||| |||||||| |||| ||| | | ||| ||| | Sbjct 45253 GAACGCCAACACACGAGAGATAAAGTATCTTTCGTTTTCATTCATCTTGGTTTCCCAATC 45312 Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086 | ||| |||| || || | ||| || ||||||| || || ||||| ||||| || Sbjct 45313 ATGTTGATCCTTAGACAAGTCGATTTCCTCTGCAGTCCAGAAAGAGGCTTCAGCTTTCTT 45372 Query 5087 GTA 5089 ||| Sbjct 45373 GTA 45375 >seq14752 Length=160396 Score = 251 bits (278), Expect = 6e-62 Identities = 562/839 (67%), Gaps = 10/839 (1%) Strand=Plus/Minus Query 4259 TTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTC 4318 ||| || || || || |||||||| || || |||||||| |||| || ||||| || Sbjct 138068 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTAGTTTTTCCTTGCAAAGAAATCAGCTC 138009 Query 4319 CATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAA 4378 |||||||||||| || || | | ||||||| ||| | |||| ||| | | Sbjct 138008 CATAAAATCAAAGGGGTTTGAGACATTGTAATTTTTAGGGAAACCAAGAGATACCAAGAG 137949 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438 ||||| || |||||| | || |||| ||| | | | ||| || |||||||| | Sbjct 137948 ACGGTCGGCAACAAATCTAACGTATTGGCACATCAACTTGTCGTTCATACCAATTAAACG 137889 Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 |||||| || | | | || | | ||| || || || || ||||| || | Sbjct 137888 CACAGGAAGAGAATCATTAAAGTATGACTCTTCGATCTCAACCGCCTCAGTGATAATTTG 137829 Query 4499 TTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATC 4558 | | || | || || | || | || | |||||| | || ||||||| Sbjct 137828 AAGAACAGTTTCATGTGAAGGCTGATCAATCAAATGATGAAACAAGAGGCATCCAAAATC 137769 Query 4559 ACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAA 4618 | ||| | ||||| || | |||| | ||| ||||||| || || || |||||||| Sbjct 137768 AGCATGTAGGCCTTCATCACGAGTAATGAATTCATTAGAAAGAGTCAAACCAGGCATTAA 137709 Query 4619 ACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTAC 4678 ||| | ||| || |||||||| |||| |||||| || ||||||||||| || || || || Sbjct 137708 ACCACGCTTCTTGAGCCAAAAGATAGAGGCAAACGATCCAGAAAAGAAGATACCCTCCAC 137649 Query 4679 GGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG--TCTTTA---ATCCAT 4733 || ||||| || || ||| |||| | || | ||| |||| || ||| |||||| Sbjct 137648 AGCAGCAAAAGCAAC-AATACGGACACCAAAAGGTTGG-TTTGATTCATTAGAGATCCAT 137591 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAAT 4793 || || ||||||||||| || | ||||| | ||||| || | || || |||||||| Sbjct 137590 TTGAAAGCCCAGTTAGCCTTATCCTTAATGACAGGAATGGTTTCGATGGCATTAAATAAG 137531 Query 4794 TTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 ||| |||| | |||| ||| ||||| || || | ||| ||||||||||| Sbjct 137530 AATTCTTTCTCAATAGAATCTTTAATGTAAGTATCGATCAATAGCGAGTACATTTCAGAG 137471 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 || || || || || |||||||| ||||| ||||| | || || | ||| | ||| Sbjct 137470 TGAATGTTCTCAATCATGATCTGAAAACCGTAGAAGCACTTTGCCTCGGCTACCTTGACT 137411 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 || | || || ||| || | || || || || ||||| ||| | ||||| || Sbjct 137410 TCATCGCAGAAGTTTTTCACCAGATTCTCATTGACAATACCATCAGAAGTAGCAAAGAAG 137351 Query 4974 GCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT---TTCCAGTGGGGC 5030 ||||| ||| |||| |||||| | || ||| || |||||| | ||||| | Sbjct 137350 GCCAACACACGAGAAATAAAGAATCTCTCATCATCATTTAGTTTTTCCTCCCAGTCAATC 137291 Query 5031 AAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089 || || || | | ||||||||| || | ||||| || || ||||| |||||||| || Sbjct 137290 AAGTCCTTTGACAGATCAACTTCCTCGGCTGTCCAGAAAGAGGCTTCAGCTTTTTTATA 137232 Score = 241 bits (266), Expect = 1e-58 Identities = 609/918 (66%), Gaps = 15/918 (2%) Strand=Plus/Minus Query 4200 AGTTAAAAGTCCACGTCTAGAGTAAACGTCATATCGGACTTTGAA--CA-AACACCAAAT 4256 ||||||||||| | || ||||| || | ||| |||| | || ||||||| Sbjct 136060 AGTTAAAAGTCGGCATCAAGAGTGAAACTACGATCTTCTTTTGCATTCATAACACCAGCA 136001 Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||| || || || |||||||| ||||| || || || |||| | ||||| Sbjct 136000 CGTTGGTAATCAGAAACACGCTTTTCAAAGAAGTTTGTCTTTCCTTGAAGGGAAATCAAA 135941 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 |||||||||||||| ||||||| | || || || || | |||| || | | Sbjct 135940 TCCATAAAATCAAAGGGATTAGAAACATTATAGTGCTTGGGGAAACCAAGAGAAACCATC 135881 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 | || ||||| |||||||| | ||||| | ||| ||||| || || || || ||| Sbjct 135880 AGACGATCAGCAACAAATTCGACGTACTGACACATTAGTTCATCATTCATACCGATCAAT 135821 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 || || || | || | | | ||||| ||| ||||| ||||| || || | || Sbjct 135820 CTAACGGGCAATGCTTCTTTGAAAAAACTTTGCTCTATCTCGACGGCCTCCGTCAAAATC 135761 Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAA 4556 | | | || | || |||| ||| | | || || || | ||| ||||| Sbjct 135760 TGAAGAACAGTTTCATGGGAAGGTTGATTAATCATGTGGTGGAATAAAAGACAGCCAAAA 135701 Query 4557 TCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATT 4616 ||| ||| | |||||| || | |||| | || || || | || || || |||||| Sbjct 135700 TCAGCATGAAGACCTTCATCACGAGTAATGAACTCATTGGAGAGAGTCAAACCAGGCATT 135641 Query 4617 AAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCT 4676 ||||| | |||||| |||||||| |||| |||||| || || |||||||| | ||||| Sbjct 135640 AAACCACGCTTTTTGAGCCAAAAGATAGAGGCAAACGAGCCTGAAAAGAAGACACCTTCG 135581 Query 4677 ACGGCGGCAAACGCTACTAATCGGGACC-CGAACGA---GCTGGCTTTGTCTTTAATCCA 4732 | ||||| || || || | || |||| | | ||| || || ||||| Sbjct 135580 ATAATAGCAAAGGC-ACAGATACGTACGGCGAAAGGTTGGTTGGATTCGTTGGCGATCCA 135522 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 ||| || ||||| | ||| || |||| | ||||| || | ||| || ||||| || Sbjct 135521 TTTGAAAGCCCAATCAGCCTTGGTCTTGATTTGAGGAATAGTCTCTATGGCATTAAACAA 135462 Query 4793 TTTACTT--TTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 | || ||||||| || || | ||||| || || || | |||| ||||||||| Sbjct 135461 A--AATTCCTTTTCAACGGGATCCTTGATATACGTATCGATCAATAGGGAGTACATTTCA 135404 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 || || || || || || |||||||| |||||||| ||| |||| || || | | Sbjct 135403 GAGTGAATGTTCTCAATCATGATCTGAAAACCGTAAAAACATTTAGCCTCGCCTATCTTA 135344 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 ||||| | ||||| || | ||||| ||||| || || || || || | ||||||| Sbjct 135343 ACTTCATCGCAAAAGTTTGCAACTAAATTTTCATTGACGATGCCATCCGAAGTTGCAAAA 135284 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT---TTCCAGTGG 5027 || || || ||| | || |||| |||| || || || ||| | ||| | Sbjct 135283 AAAGCTAATACACGGCCGATGAAGTGGCGTTCATCCTTGTTCAGCTTTTCCTCCCAATCA 135224 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087 | | ||||| | ||||||||| ||||| |||||||| ||||| ||||| ||||| ||| Sbjct 135223 AGTATGTCTTTGGATAAATCAACCTCTTCCACAGTCCAGAACGAAGCTTCGGCTTTCTTG 135164 Query 5088 TACATAGACCAAATATCA 5105 || | |||||| ||| Sbjct 135163 TAAAACTCCCAAATTTCA 135146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426968214622121