Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq182 93.3 4e-14 >seq182 Length=390966 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || ||||| || ||||| ||| | || || ||| || || Sbjct 118408 ATGCAAATCTTCGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 118349 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | || || | || || || || || || | ||||| Sbjct 118348 GACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACCAA 118289 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| ||| || || || | || || | || ||||| ||||||||| Sbjct 118288 CAACGTCTTATCTTCGCCGGTAAGCAATTAGAAGATGGTCGTACCCTTTCTGACTACAAC 118229 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| ||||| | || || || || || Sbjct 118228 ATCCAAAAGGAATCTACCCTTCACCTTGT 118200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217705864320