Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq154 105 5e-18 >seq154 Length=675934 Score = 105 bits (116), Expect = 5e-18 Identities = 173/246 (70%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017 |||| || || ||| ||| |||| || ||||| | || ||| ||||||| || Sbjct 471629 TTTGGTTCAATATCTTCATTAGAAGCTTTCTTTTTTATAA---TTAACTTTGGGAATGGT 471573 Query 97018 CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCA 97077 || ||| ||| ||| || ||| |||||| ||||| ||||| ||| || |||| | Sbjct 471572 CTTGGATTTCTTTTAATTTGTTCTTGGAGAGCTTCAATATGATTATTATATATATGAGTA 471513 Query 97078 TCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC-AGTGACATGGGCGATCATACA 97136 ||||| | | |||||||| |||||| ||| || | | || ||||| || | ||| Sbjct 471512 TCTCCCATATCATGAATAAAAGTTCCAGGTT-TAATTCCAATTACGTGGGCAATTAAACA 471454 Query 97137 AGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCT 97196 ||||||| ||||| || ||||| || || || || || | ||| | |||| |||||| Sbjct 471453 TGTTAATAAGGAATAACTGGCAATATTGAATGGTACGCCCAATCCAACATCACATGATCT 471394 Query 97197 TTGATA 97202 |||||| Sbjct 471393 TTGATA 471388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783019468240