Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq135 82.4 7e-11 >seq135 Length=816381 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||| || ||||| | || | |||| |||| || || || ||||||||||||||||| Sbjct 3799 ACCACCACGTAAACG-AAGAACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAG 3741 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | || || |||||| |||| | ||| || ||||| || | Sbjct 3740 AAAGAGTACGTCCATCTTCTAATTGCTTACCAGCGAAGATTAAACGTTGTTGATCTGGTG 3681 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | || || ||||| ||| ||| || || || | ||| | || || | || | || Sbjct 3680 GAATACCTTCCTTATCTTGAATCTTAGCCTTGACATTTTCAATAGTATCAGATGAT-TCA 3622 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCT 118734 || || | ||| | || || || || |||||||| |||||||||| Sbjct 3621 ACTTCTAAGGTAATGGTCTTACCTGTAAGAGTTTTAACAAAAATCT 3576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829173344544