Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq154 95.1 2e-14 >seq154 Length=675934 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 104104 AATAATGAAGAAAAACAATATTTAAATTTATTAGAAAAAGTTCTTTTTCAAGGCGAAGAT 104163 ||| | ||||||| |||||||||||| | || ||||| || | |||| ||| Sbjct 470659 AATGAAGAAGAAATGCAATATTTAAATCTTATAAAAAAAATTATAAAGGAAGGAGAATTA 470718 Query 104164 CGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGGAGAACA---ATTAAAATTT 104220 | | |||||||| || | || ||| | |||||||| | | ||||| |||| Sbjct 470719 AGAAATGATAGAACTGGTACAGGTACTCGAGCAATATTTGGACCAAATCCATTAAGATTT 470778 Query 104221 AATTTAAGAACATC-TTTTCCGTTACTAACTACaaaaaaaGTTTTTTGGAAAGGAGTTGT 104279 ||| | || ||| |||||| ||| |||| ||||||||||| |||| | |||||| | Sbjct 470779 TCTTTGA-AAGATCATTTTCCTTTATTAACAACAAAAAAAGTATTTTTTAGAGGAGTAGC 470837 Query 104280 AGAAGAACTCTTATGGTTTATTAGCGG 104306 ||||||| | || ||||||||||| || Sbjct 470838 AGAAGAATTGTTTTGGTTTATTAGAGG 470864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679812428538240