Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq154 120 6e-22 >seq154 Length=675934 Score = 120 bits (132), Expect = 6e-22 Identities = 294/436 (67%), Gaps = 10/436 (2%) Strand=Plus/Plus Query 35131 AGAAAGAGGAGTGAAGAAGGACGATAGAACTGGAACAGGAACTCTATCCATTTTTGGACC 35190 || ||| || | ||||| | ||||||||||| ||||| |||| | | || |||||||| Sbjct 470705 AGGAAGGAGAATTAAGAA--ATGATAGAACTGGTACAGGTACTCGAGCAATATTTGGACC 470762 Query 35191 CCAA--ATGAGGTTCTCTCTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATT 35248 | || | | | | |||| || | || | |||| | | || || || ||| | Sbjct 470763 AAATCCATTAAGATTT-TCTTTGAAAGATCATT-TTCCTTTATTAACAACAAAAAAAGTA 470820 Query 35249 TTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAA 35308 || | |||||||| | |||||| | | ||||| || || || |||| || | ||| Sbjct 470821 TTTTTTAGAGGAGTAGCAGAAGAATTGTTTTGGTTTATTAGAGGTGATACTGATTCAAAA 470880 Query 35309 GAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGAC 35368 ||| | || || || || || || ||| | | ||||| || || |||||| | || Sbjct 470881 ATATTATCAAAAAAAAATATTCATATTTGGGATGGAAATGGTTCTCGTGAATTTCTTGAT 470940 Query 35369 AGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGG 35428 | | || ||| |||||| ||| || ||||| ||||| |||| || | |||||| Sbjct 470941 AAAATTGGATTAACAAATAGAGAAGAAGGGGATTTAGGACCAATATATGGTTGGCAATGG 471000 Query 35429 CGTCATTTTGGTGCTGAATATGATA-CCTGTTCTTCCGATTATACTGGAAAGGGTATTGA 35487 ||||||||||||||| ||||| ||| ||| | | || ||||| ||| | || | || Sbjct 471001 CGTCATTTTGGTGCTAAATAT-ATAGATTGTCATACAGACTATACAGGACAAGGAAAAGA 471059 Query 35488 TCA-ATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTA 35546 ||| || || | || | | | || | | |||||| |||||||| || || | Sbjct 471060 TCAGCTTCGCGATGTTATTGACAAAATTGTTA-ATAATCCAACAGATAGAAGAATAATCA 471118 Query 35547 TGACGGCATGGAATCC 35562 || | ||||||||||| Sbjct 471119 TGTCTGCATGGAATCC 471134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581058461560