Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq193 82.4 6e-11 >seq193 Length=296419 Score = 82.4 bits (90), Expect = 6e-11 Identities = 172/255 (67%), Gaps = 1/255 (0%) Strand=Plus/Plus Query 19955 TAAAATTTAAATATATTTTATC-ATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGT 20013 |||| |||| || ||||| | | ||||| || || | | || || || || || || Sbjct 32630 TAAATTTTATCTAAATTTTTTTTAATTTCCACCACGAAGACGTAAGACTAAGTGAAGAGT 32689 Query 20014 AGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGC 20073 |||||||||||| || ||||| || | ||| |||||| |||||||| || || Sbjct 32690 AGATTCTTTTTGAATATTGTAGTCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGC 32749 Query 20074 ATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCAC 20133 | |||| | | |||||||| || | ||||| || || ||| ||| || || Sbjct 32750 AAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTTTGACTTGAC 32809 Query 20134 CTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTT 20193 | ||| || || || ||| ||| | ||||| ||||| || || || ||||| Sbjct 32810 GTTTTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTT 32869 Query 20194 GACAAAAATTTGCAT 20208 |||||||||||||| Sbjct 32870 AACAAAAATTTGCAT 32884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419586013617192