Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq146 145 1e-30 >seq146 Length=754361 Score = 145 bits (160), Expect = 1e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || || || ||||||||||| |||||||| || ||||||||||| ||||||||| | ||| Sbjct 419826 GGTATTACTAAGCCAGCTATTCGTCGTCTTGCCCGTCGTGGTGGTGTCAAGCGTATTTCT 419885 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || | | || ||||| | ||||| |||| | ||| |||||||| | | ||||| | | Sbjct 419886 GGTCTTATTTACGAAGAAACTCGTGGTGTTCTTAAGGTCTTCCTCGAAAATGTTATTCGT 419945 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 ||||| | ||| || || || ||||| | |||||||| || || | ||| | ||| Sbjct 419946 GATGCCGTTACCTACACTGAACATGCTAAGAGAAAGACTGTTACTTCTTTAGATGTTGTC 420005 Query 16652 TATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || || | || |||||||| |||| |||| ||||| || ||||| Sbjct 420006 TACGCTCTTAAGCGTCAAGGTCGTACTCTTTACGGTTTCGGTGGTTAA 420053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074987880776