Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq135 84.2 4e-11 >seq135 Length=816381 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 193792 AGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACAC 193851 ||||||| || || ||||| ||||| |||| || | || | | |||| |||| Sbjct 662269 AGGCATCAACTAGTGAACTTTATGGAAAAGTTCAAGAAATACCTCAAAATGAAAAAACAC 662328 Query 193852 CATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGA 193911 ||||| ||||||| || || |||||||| || || || |||| |||||||| | | Sbjct 662329 CATTTTATCCACGTTCACCCTATGGTGTTGCTAAATTATATGCCTATTGGATTGTTGTTA 662388 Query 193912 ATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTC 193971 | |||||||| | ||| | ||| || |||||| | || ||||| ||| || Sbjct 662389 ACTATCGTGAAGCTTATAATATGTTTGCTTGTAATGGTATATTATTTAATCATGAAAGTC 662448 Query 193972 CAAGAAGAGGT 193982 ||||||||||| Sbjct 662449 CAAGAAGAGGT 662459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807552858089920