Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq152 95.1 3e-14 seq154 86.0 2e-11 >seq152 Length=734684 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 371070 TCGAAGAGACGATCCTTTGCAACGTCTCCCGCACCATGACTAATGATGGAATCCTTCTCC 371129 ||||| ||||| ||||| || | | | |||||||||||||| || ||||||| ||| Sbjct 196031 TCGAAAAGACGTTCCTTCAAAAATTGTGCAGCACCATGACTAATCATACAATCCTTTTCC 196090 Query 371130 ATCTCACCAATTCGGAGACCACCATCGCGTGACCGTCCTTCTGTTGGCGCGCGTGTAAGT 371189 || ||||| | || ||||||||||| || || | |||||| ||| || ||||| Sbjct 196091 ATTTCACCGAAACGAAGACCACCATCACGAGATCTACCTTCTACTGGTTGACGAGTAAGA 196150 Query 371190 AGCTGTTGTGCACCGCGGTTGCGTGCATGTGA--CTTGTCAACTACCATGTGCTTGAGGC 371247 | ||| || ||| || || | ||||| ||| ||| ||||||| ||||| | | Sbjct 196151 ATTTGTACTGGACCACG--AGCACGACTGTGAATCTTATCATCTACCATATGCTTTAAAC 196208 Query 371248 GCTGATAATA 371257 | |||||||| Sbjct 196209 GTTGATAATA 196218 >seq154 Length=675934 Score = 86.0 bits (94), Expect = 2e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 111311 TCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCT 111370 ||||||||| | | |||||||| | || || | ||| | | |||||| | | Sbjct 470790 TCATTTTCCTTTATTAACAACAAAAAAAGTATTTTTTAGAGGAGTAGCAGAAGAATTGTT 470849 Query 111371 GTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTG 111430 ||||||||| | || ||| || |||| | | || ||||||| | | ||||| Sbjct 470850 TTGGTTTATTAGAGGTGATACTGATTCAAAAATATTATCAAAAAAAAATATTCATATTTG 470909 Query 111431 GGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGG 111490 |||||||||||| || ||||| ||||| ||| | |||| | | | |||||||| Sbjct 470910 GGATGGAAATGGTTCTCGTGAATTTCTTGATAAAATTGGATTAACAAATAGAGAAGAAGG 470969 Query 111491 TGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGC 111535 ||| | |||||| | || || | |||||||| || |||||||| Sbjct 470970 GGATTTAGGACCAATATATGGTTGGCAATGGCGTCATTTTGGTGC 471014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349725781424