Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_008515.1 Length=165890 Score E Sequences producing significant alignments: (Bits) Value seq154 86.0 7e-12 seq57 82.4 8e-11 >seq154 Length=675934 Score = 86.0 bits (94), Expect = 7e-12 Identities = 123/171 (72%), Gaps = 7/171 (4%) Strand=Plus/Plus Query 60631 GAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTT---AAAGCGAAC 60687 |||||||||||| ||||| || ||||||| ||||| | | || ||| || Sbjct 318348 GAAGGTACGAGCAATAACTTCTTTTTGCTGTTGTGGAGTTA---ATTTTACAAAATTGAC 318404 Query 60688 TGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATC 60747 ||||||||||| ||||| || || || | ||||| ||||| ||||| | ||||| Sbjct 318405 AGCATAACCGGAAACACGAATAGTAAGGTTTGGATAATTTTCTGGATGAACCATAGCATC 318464 Query 60748 TTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGA-CCACCTT 60797 ||| || |||||||| ||||| |||||||| || || ||| || |||| Sbjct 318465 TTCTAGGGTTTCACGTTTAAGAACATTAACGTTAAGATGATGAGCCCCCTT 318515 >seq57 Length=911805 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 60631 GAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACTGC 60690 |||||||||||| ||||| || || || | ||||||| | |||| ||| || Sbjct 6074 GAAGGTACGAGCAATAACTTCCTTTTGTTGAGCTGGAGTCAACTTGACAAAGTTAACAGC 6133 Query 60691 ATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCTTC 60750 |||||| || ||||| || || || | ||||| ||||| ||||| | |||||||| Sbjct 6134 ATAACCAGAAACACGAATAGTAAGATTTGGATAGTTTTCTGGATGAGCCATAGCATCTTC 6193 Query 60751 CAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 60795 | |||||||| ||||| ||||| || || || ||| |||| Sbjct 6194 TAAGGTTTCACGCTTAAGAACATTAACATTAAGATGATGAGCACC 6238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530718460912000