Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq193 84.2 2e-11 seq182 84.2 2e-11 >seq193 Length=296419 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || |||||||||||||| |||| ||||| || | || |||| ||||||||||| || Sbjct 33606 TCTTTTTGAATATTGTAGTCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 33665 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | || || || || | ||| | | ||||| | | ||| | |||| |||| | Sbjct 33666 ATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTAT-CTTGAATCTTTGACTTGACGTT 33724 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||||| || || | || || ||||| || |||| |||||||| Sbjct 33725 TTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTTAC 33784 Query 42197 AAAGATTTGCATTTT 42211 || ||||||||||| Sbjct 33785 GAAAATTTGCATTTT 33799 >seq182 Length=390966 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| |||| || || || | || |||| |||||||| ||||| Sbjct 118218 TCCTTTTGGATGTTGTAGTCAGAAAGGGTACGACCATCTTCTAATTGCTTACCGGCGAAG 118277 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || || || ||||| | ||| | | ||||| || ||| || ||||| | Sbjct 118278 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTAGCTTTGACATTT 118337 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||| ||||| || || | || ||||| || ||||| || || || || Sbjct 118338 TCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACG 118397 Query 42198 AAGATTTGCAT 42208 ||||||||||| Sbjct 118398 AAGATTTGCAT 118408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211224682880