Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_012663.1 Length=60074 Score E Sequences producing significant alignments: (Bits) Value seq164 120 1e-22 >seq164 Length=541120 Score = 120 bits (132), Expect = 1e-22 Identities = 338/506 (67%), Gaps = 20/506 (4%) Strand=Plus/Plus Query 17970 ATTGTAGAACCAACCTCTGGTAATACTGGAATCGGTTTAGCTATGGTTGGAGCAGCTCTT 18029 ||| | |||||||| |||||| ||||| || ||||||||| ||||| ||| Sbjct 370640 ATTATTGAACCAACTAGTGGTAACACTGGTATTGGTTTAGCTTCTGTTGGTCGCGCTAAA 370699 Query 18030 GGACATCCAGTTACTATTGTAATGCCAGAATCATTCTCTATGGAACGTAGACAAATTATC 18089 || ||| |||| ||||||| | ||||| | ||||| |||||| | | |||| Sbjct 370700 GGCTATCGTGTTATTATTGTATTACCAGATAGTATGTCTATTGAACGTCGTAAGCTTATT 370759 Query 18090 CGTGCTTATGGTGCTAACTTAGTTTTAACACCTGCTAGTGAAGGAATGAAAGGTGCTATC 18149 | | || ||||||| | || ||| | || || | | ||||| ||||| |||||| | Sbjct 370760 CAAGGTTTTGGTGCTGAATTGGTTCTTACTCCAGGAAAGGAAGGCATGAAGGGTGCTGTT 370819 Query 18150 GCTAAAGCCAAAGAAATTGCCAAAGA-TATT--AACGGATTTATACCAATGCAATTTGAG 18206 | ||| || || |||||||| || ||| ||| ||||| || |||||| | Sbjct 370820 GATAAGGCTAATGAAATTGCTGCTGAATATCCAAACTCTTTTATTCCCCAGCAATTCAAC 370879 Query 18207 AACTTCTGGAATCCTACAGCTCATTTTGA---TAACACAGCTTTTGAAATCATTGATGAA 18263 || || | | | ||||| || ||| | || | | ||||| || || || Sbjct 370880 AA--TCCAGC-TAATGCAGCTTATCATGAACGTGTAACCGGTGAAGAAAT-ATGGA-GAG 370934 Query 18264 CTTACTAAAAGTGGTAAACGTCCAGATATGTTTGTAGCAGGAGTTGGAACTGGTGGCACT 18323 || || || || || || ||| | ||||| || || ||||| |||||||| || Sbjct 370935 ATT-CTGAAGGT----AAGGTT--GATTTCTTTGTTGCTGGTGTTGGTACTGGTGGTACA 370987 Query 18324 ATTACTGGAGCAGGTCATTCACTCAAAGAAGAATT-TCCTAGCATTAAAATTGTTGGAGT 18382 || | || | ||| || | |||||| || ||| | |||| ||||||| ||| Sbjct 370988 GTTTCAGGTGTTGGTGCCTCTTT-AAAGAAACATAATCCAAATGTTAAGATTGTTGCAGT 371046 Query 18383 TGAATCAGCAGAATCACCAGTACTTAGTGGAGGAGAACCTGGACCACATAAGATTCAAGG 18442 |||| ||||||| || ||| || ||| | ||| || |||| ||||||||||||||||| Sbjct 371047 TGAACCAGCAGATTCTCCATTAATTACTACAGGTAAAGCTGGTCCACATAAGATTCAAGG 371106 Query 18443 TATTTCAGCAGGTTTTATTCCACAAA 18468 ||| || ||||||||||||| Sbjct 371107 TATCGGTGCTAACTTTATTCCACAAA 371132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192114670722624