Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq182 116 9e-21 seq193 105 2e-17 >seq182 Length=390966 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || || |||||||||| ||||||||||| | || | |||||| Sbjct 118197 AGAACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTACGACCATCT 118256 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | ||||| ||||||||||| ||||| || ||||| || ||| ||||| || Sbjct 118257 TCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCT 118316 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || ||| | ||||| | | ||| || || | || || ||| Sbjct 118317 TGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTC 118376 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || ||||| || || ||||| Sbjct 118377 TTACCCGTAAGGGTTTTGACGAAGATTTG 118405 >seq193 Length=296419 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | ||| ||||| || || ||||| | |||||||||| | ||| Sbjct 32664 CGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGAGTA 32723 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| | || || || || || || | ||| || || || || ||| ||| Sbjct 32724 CGTCCATCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCT 32783 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||| ||| ||| ||| | ||||| | | ||| || || || Sbjct 32784 TCCTTATCTTGAATCTTTGACTTGACGTTTTCAATAGTGTCAGAAGATTCAACTTCTAAA 32843 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | |||||| ||||||||||| Sbjct 32844 GTAATAGTTTTACCAGTTAAAGTTTTAACAAAAATTTG 32881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918095655544