Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq182 105 7e-18 >seq182 Length=390966 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || ||||| || ||||| ||| | || || || || || Sbjct 118408 ATGCAAATCTTCGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 118349 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| || |||| || || || || ||||| | |||||| Sbjct 118348 GACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACCAA 118289 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | ||| || || || | || || | || ||||| ||||||||| Sbjct 118288 CAACGTCTTATCTTCGCCGGTAAGCAATTAGAAGATGGTCGTACCCTTTCTGACTACAAC 118229 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 |||||||||||| | || || || | || || ||||| Sbjct 118228 ATCCAAAAGGAATCTACCCTTCACCTTGTTCTTCGTTT 118191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171349498880