Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq154 95.1 2e-14 seq152 87.8 2e-12 >seq154 Length=675934 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 104933 TGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTCGAAAAGAA 104992 ||| ||| |||||||| ||| | ||| | ||| |||||| | || ||||| Sbjct 470908 TGGGATGGAAATGGTTCTCGTGAATTTCTTGATAAAATTGGATTAACAAATAGAGAAGAA 470967 Query 104993 GGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGAC 105052 || |||||||||||||| ||||| | |||||| | ||| ||| ||| ||||||| || Sbjct 470968 GGGGATTTAGGACCAATATATGGTTGGCAATGGCGTCATTTTGGTGCTAAATATATAGAT 471027 Query 105053 TGTGATACCGACTATACCGGCCAAGGTATAGACCA 105087 ||| |||| |||||||| || ||||| | ||| || Sbjct 471028 TGTCATACAGACTATACAGGACAAGGAAAAGATCA 471062 >seq152 Length=734684 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 126906 ATGTATTGTGGTTTTACTGG-AAGAAGGATAAAGAGTAAAATTTTTATAGGTCCAACATA 126964 |||| | |||| |||||| |||||| | ||| ||| |||| | || |||||||| Sbjct 196275 ATGTTTAATGGTCATACTGGTAAGAAGCTTCAAGCACAAA-TTTTCCTTGGACCAACATA 196217 Query 126965 CTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGT 127024 ||||| ||| | || |||||||| | ||||| || || | | || ||||| ||| Sbjct 196216 TTATCAACGTTTAAAGCATATGGTAGATGATAAGATTCACAGTCGTGCTCGTGGTCCAGT 196157 Query 127025 AACAACA-TTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTG 127083 | || |||| |||||||||| ||| | || | | |||||| | | || | Sbjct 196156 ACAAATTCTTAC-TCGTCAACCAGTAGAAGGTAGATCTCGTGATGGTGGTCTTCGTTTCG 196098 Query 127084 GAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAA 127139 | ||||||||||| |||||||| | |||||| || |||||||||| || ||| Sbjct 196097 GTGAAATGGAAAAGGATTGTATGATTAGTCATGGTGCTGCACAATTTTTGAAGGAA 196042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658401290630720