Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq164 84.2 5e-11 >seq164 Length=541120 Score = 84.2 bits (92), Expect = 5e-11 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 321605 TAAATGTAAATGTATTATCACGTTCTCAATTAGAAGAAGCACAGAAATTTCCTGAAAAAT 321664 ||||||| ||||| ||| ||| ||||||||| || || ||| ||||| | Sbjct 1073 TAAATGTTAATGTTTTAGTTCGTGAAACATTAGAAGATGCCATGATTCATCCCGAAAACT 1132 Query 321665 ATCCTCAACTTA-CTATTCGTGTTTCTGGATATGCAGTTCGTTTTAATTCTCTTA-CGAA 321722 |||| |||||| | ||||||||||| ||||||||||||| ||| |||| ||| || Sbjct 1133 ATCCA-AACTTAACCATTCGTGTTTCAGGATATGCAGTTCACTTT-ATTCGTTTATCGCC 1190 Query 321723 AGAACAACAAAATGATGTAATTTCACGAACTTTC 321756 | ||||||||| || || ||| || |||||||| Sbjct 1191 ACAACAACAAAGAGAAGTTATTGCAAGAACTTTC 1224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106454311054784