Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq135 134 2e-26 >seq135 Length=816381 Score = 134 bits (148), Expect = 2e-26 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 47970 ACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGA 48029 ||| | ||||||| |||||||||||| | |||||| |||| ||| |||| || | Sbjct 662459 ACCTCTTCTTGGACTTTCATGATTAAATAATATACCATTACAAGCAAACATATTATAAGC 662400 Query 48030 TTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACG 48089 |||||||||||| || ||||| || |||| | ||| ||||||||||| || ||||| Sbjct 662399 TTCACGATAGTTAACAACAATCCAATAGGCATATAATTTAGCAACACCATAGGGTGAACG 662340 Query 48090 TGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACT 48149 |||||| || ||||| | || | || || | ||||| || || |||||||||||||| Sbjct 662339 TGGATAAAATGGTGTTTTTTCATTTTGAGGTATTTCTTGAACTTTTCCATAAAGTTCACT 662280 Query 48150 GGTGGATGC 48158 || ||||| Sbjct 662279 AGTTGATGC 662271 Score = 113 bits (124), Expect = 6e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 48378 TTGATCATAAATGTGATCAATTCTATGTGTATTAATTAAAGAAGCCCGACGGACAATACC 48437 || || ||| || || |||||||| || || | | |||||| || || | |||||| Sbjct 661061 TTTATTATATATATGTTCAATTCTTGCAGTGTTGAATGAAGAAGAACGTCGTATAATACC 661002 Query 48438 ATGAACCTCATACCCCTTTTCAAGAAGAAGTTCTGCTAAGTATGAACCATCTTGTCCTGT 48497 |||||| | ||| || || |||||||||||||| ||| |||||||||||||| ||||| Sbjct 661001 ATGAACTTTATATCCTTTACTAAGAAGAAGTTCTGTTAAATATGAACCATCTTGACCTGT 660942 Query 48498 AATACCAGTGATTAAAGCAACT 48519 |||||| ||||||| || ||| Sbjct 660941 GATACCACTGATTAATGCTACT 660920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665492470066240