Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq158 91.5 2e-13 >seq158 Length=610027 Score = 91.5 bits (100), Expect = 2e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 13517 AAGAAGACCGATGGTGCTCGCAAGTCCAAAATTACCGGTATTCCCAAGTTGGATGACGCG 13576 || ||||| |||||| | | || | |||| | |||||||| || || ||||| || Sbjct 601552 AAAAAGACGGATGGTCATAAAAGATCAAGAATTTCTGGTATTCCAAAATTAGATGATGCA 601493 Query 13577 AACAAGGCGGGTACGGCACAATCTGGAAAGTGTACTCTCATTGTCACAGAGGGTGATTCG 13636 || || || ||||| | | || | | ||| | | ||| | || || || ||||| Sbjct 601492 AATAATGCTGGTACAAAATATTCAAAAGATTGTGTTTTAATTCTTACGGAAGGGGATTCT 601433 Query 13637 GCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACGGTGTGTTC 13696 || |||||| | || || ||| | | ||||||||||||||| | || ||||| ||| Sbjct 601432 GCCAAAACCTTAGCTATTAGTGGTTTGACAGTCGTTGGTCGTGATAATTATGGTGTATTC 601373 Query 13697 CCACTTCGCGGT-AAATGTAAGAATGTTCGGGACGCTTC 13734 ||| | || ||| |||||| | |||||||| || || || Sbjct 601372 CCATTACGTGGTAAAATGTTA-AATGTTCGTGATGCCTC 601335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567869948160