Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq154 136 5e-27 seq158 118 1e-21 seq169 93.3 5e-14 >seq154 Length=675934 Score = 136 bits (150), Expect = 5e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||| | || ||| |||||| |||| |||||||||||| |||| | | | | Sbjct 470840 AAGAATTGTTTTGGTTTATTAGAGGTGATACTGATTCAAAAATATTATCAAAAAAAAATA 470899 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 || | ||||| ||| |||||||||||||||||| | ||| | || || || | | Sbjct 470900 TTCATATTTGGGATGGAAATGGTTCTCGTGAATTTCTTGATAAAATTGGATTAACAAATA 470959 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || ||||||| |||||||| ||||| ||||| | |||||| | ||| || ||| ||| Sbjct 470960 GAGAAGAAGGGGATTTAGGACCAATATATGGTTGGCAATGGCGTCATTTTGGTGCTAAAT 471019 Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGGA 172613 |||| || ||| ||||||| || |||||||||||| Sbjct 471020 ATATAGATTGTCATACAGACTATACAGGACAAGGA 471054 >seq158 Length=610027 Score = 118 bits (130), Expect = 1e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 ||||||||||| ||| | | ||| ||| |||| ||||| |||| || | ||||||||| Sbjct 600640 ATTAAGGTTGCCCAACTTACTGGTTATATTGCTGAACATACAGCCTACCATCATGGTGAA 600581 Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069 |||| | | | | |||| |||| || || |||||||||||||||| |||||| | Sbjct 600580 CAAAGTCTTTCTCTTGCTATTGTTAATTTAGCTCAAGATTTTGTTGGTAGTAATAATGTT 600521 Query 166070 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCT 166129 |||| | | || |||||||||| ||||| | ||| |||| ||||| ||| ||||| Sbjct 600520 CCATTGTTAGTTCCAAATGGTCAATTCGGTACACGTTTACAAGGTGGTAAGGATGCTGCT 600461 >seq169 Length=489420 Score = 93.3 bits (102), Expect = 5e-14 Identities = 103/133 (77%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 194242 CCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGAT 194300 || ||| |||| |||||||| | ||| || |||| |||||| || ||||||| | || Sbjct 117474 CCAGAATTAGGTGATAAATTCTCTTCAAGACATGG-TCAAAAGGGTGTTTGTGGTTTAAT 117532 Query 194301 TTATTCACAAGAAGATATGCCATTTAC--AACTTCAGGTATGGTACCAGATATTATTATC 194358 | | |||||||||||||||||||| | ||| ||||| || |||||||||||||| Sbjct 117533 TGTTAATCAAGAAGATATGCCATTTACTGATCTT--GGTATTGTTCCAGATATTATTATG 117590 Query 194359 AATCCAAATTGTA 194371 |||||| || ||| Sbjct 117591 AATCCACATGGTA 117603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632487765780160