Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq193 91.5 1e-13 >seq193 Length=296419 Score = 91.5 bits (100), Expect = 1e-13 Identities = 166/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || ||||| ||||| | ||| || || Sbjct 32884 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 32825 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | | || || |||||| || || ||||| | || |||||| Sbjct 32824 GACACTATTGAAAACGTCAAGTCAAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAA 32765 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | |||| ||| |||||||| | || |||| | || | | || ||||| Sbjct 32764 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGACTACAAT 32705 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAAAAATAAATAA 110512 ||||||||||||||||| | ||| | || ||| | || || || ||||| | ||| || Sbjct 32704 ATTCAAAAAGAATCTACTCTTCACTTAGTCTTACGTCTTCGTGGTGGAAATTAAAAAAAA 32645 Query 110513 GTT 110515 || Sbjct 32644 TTT 32642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840432690376