Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_022763.1 Length=164297 Score E Sequences producing significant alignments: (Bits) Value seq154 100 3e-16 >seq154 Length=675934 Score = 100 bits (110), Expect = 3e-16 Identities = 167/234 (71%), Gaps = 7/234 (3%) Strand=Plus/Minus Query 18024 CCAAATATTTACATTTTTATCTACTAATGTTTTTAAATTCGTATCACCTTTTAGGAACCA 18083 |||||||| | |||||| | | |||| ||||| ||| ||||||||| | | ||||| Sbjct 470910 CCAAATATGAATATTTTTTTTTGATAATATTTTTGAATCAGTATCACCTCTAATAAACCA 470851 Query 18084 TAGTAACTCTTCCGCTACTAATCTAAAAGCTACATGTTTTGTTGTTAGTAACGGGAATCC 18143 | || ||||| |||||| ||||||| ||| | ||||||||||| ||| || || Sbjct 470850 AAACAATTCTTCTGCTACTCCTCTAAAAAATACTTTTTTTGTTGTTAATAAAGGAAAATG 470791 Query 18144 TTCTGACAAATCGAAT-TTCATCG-TGTAGTCGAAGATACT--TAATGTACCTGTTCCCG 18199 ||| |||| ||| || || | | | ||| || ||| | | |||||||| || | Sbjct 470790 ATCTTTCAAAGAAAATCTTAATGGATTTGGTCCAA-ATATTGCTCGAGTACCTGTACCAG 470732 Query 18200 TTCTATCACTTCTAATTTCTCCATGCTTAATTATGTATTCATATAA-ATCTAAA 18252 |||||||| |||| | |||||| | ||| || || | || ||||| || |||| Sbjct 470731 TTCTATCATTTCTTAATTCTCCTTCCTTTATAAT-TTTTTTTATAAGATTTAAA 470679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525620875695040