Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq154 89.7 7e-13 seq158 84.2 3e-11 >seq154 Length=675934 Score = 89.7 bits (98), Expect = 7e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 180494 TGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTCGAAAAGAA 180553 ||| ||| |||||||| ||| | ||| | ||| |||||| | || ||||| Sbjct 470908 TGGGATGGAAATGGTTCTCGTGAATTTCTTGATAAAATTGGATTAACAAATAGAGAAGAA 470967 Query 180554 GGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGAC 180613 || |||||||||||||| ||||| | |||||| | ||| || ||| ||||||| || Sbjct 470968 GGGGATTTAGGACCAATATATGGTTGGCAATGGCGTCATTTTGGTGCTAAATATATAGAT 471027 Query 180614 TGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTATA 180673 ||| |||| |||||| || ||||| | ||| || | || | ||||| || | || Sbjct 471028 TGTCATACAGACTATACAGGACAAGGAAAAGATCAGCTTCGCGATGTTATTGACAAAATT 471087 Query 180674 AAAAATAATCCCGAATGCCGAAGAATAATCAT 180705 |||||||| | ||||||||||||| Sbjct 471088 GTTAATAATCCAACAGATAGAAGAATAATCAT 471119 >seq158 Length=610027 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 ||||||||||| || | | |||||| ||||| ||||| || | || | ||||||||| Sbjct 600640 ATTAAGGTTGCCCAACTTACTGGTTATATTGCTGAACATACAGCCTACCATCATGGTGAA 600581 Query 172946 CAAAACCTTTGTGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACATA 173005 |||| |||| | |||| | || || || || |||||||| |||| ||||| | Sbjct 600580 CAAAGTCTTTCTCTTGCTATTGTTAATTTAGCTCAAGATTTTGTTGGTAGTAATAATGTT 600521 Query 173006 ACATTACTTGAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGAT 173059 |||| | | ||| ||||||| || ||||| | | |||| ||||| ||| Sbjct 600520 CCATTGTTAGTTCCAAATGGTCAATTCGGTACACGTTTACAAGGTGGTAAGGAT 600467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655278099688000