Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq2 113 1e-19 seq201 89.7 2e-12 >seq2 Length=1203965 Score = 113 bits (124), Expect = 1e-19 Identities = 108/137 (79%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 46569 GGTaaaaaaaCAATTTTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGAT 46628 ||||||||| |||| || ||| |||||||||||||| | || |||||| || |||||| Sbjct 1017436 GGTAAAAAAGCAATATTATTTATAGACGAAATACATAGATTTAATAAATTGCAACAAGAT 1017495 Query 46629 TCGTTATTACCTTATGTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAAT 46688 || |||||| | | || ||| || || ||| ||||||||||| |||||||||||| Sbjct 1017496 TCTTTATTATCATGGGTAGAAAGAGGCGCATATACTTTAATTGGTGCCACAACTGAAAAT 1017555 Query 46689 CCATTTTTTGAAATTAA 46705 |||| ||| ||||||| Sbjct 1017556 CCATCATTT-AAATTAA 1017571 >seq201 Length=235110 Score = 89.7 bits (98), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 188764 AATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCT 188823 ||||| ||||||||||| || || ||| | |||||||||||| | || ||||| | ||| Sbjct 30887 AATGTACTTTTAGTTGGTCCAACAGGTACTGGTAAAACATTAATATCTAAAACAATTGCT 30828 Query 188824 GATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTAT 188883 || || || |||||||| | || |||||| || | || || ||||||| ||| Sbjct 30827 GAAATTTTGGATGTACCTTATTCAATTAATGATGCTACACCATTTACCCAAGCTGGATAT 30768 Query 188884 GTAGGTGAAGAT 188895 || ||||||||| Sbjct 30767 GTTGGTGAAGAT 30756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591905668046336