Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq154 86.0 7e-12 seq57 84.2 2e-11 seq173 82.4 8e-11 >seq154 Length=675934 Score = 86.0 bits (94), Expect = 7e-12 Identities = 117/162 (72%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 108427 TCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCC 108486 ||| || || |||||||| ||||| |||||||| || |||||||| | ||||| Sbjct 318507 TCATCATCTTAACGTTAATGTTCTTAAACGTGAAACCCTAGAAGATGCTATGGTTCATCC 318448 Query 108487 GGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT---AACTC 108543 ||||| ||||| | || || || ||||| ||||||||||| || ||| || | Sbjct 318447 AGAAAATTATCCAAACCTTACTATTCGTGTTTCCGGTTATGCTGTCAATTTTGTAAAAT- 318389 Query 108544 TCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTT 108585 | |||||| ||||||| || ||||| ||||||||||| Sbjct 318388 --TAACTCCACAACAGCAAAAAGAAGTTATTGCTCGTACCTT 318349 >seq57 Length=911805 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 |||| ||| || || || ||||| ||||| |||||||| | |||||||| | Sbjct 6238 GGTGCTCATCATCTTAATGTTAATGTTCTTAAGCGTGAAACCTTAGAAGATGCTATGGCT 6179 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 108541 ||||| ||||| ||||| | || || || ||||| || |||||||| ||| |||| | Sbjct 6178 CATCCAGAAAACTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTTGTC 6119 Query 108542 TCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTT 108585 ||||||||| || || || ||||| ||||||||||| Sbjct 6118 AAGTTGACTCCAGCTCAACAAAAGGAAGTTATTGCTCGTACCTT 6075 >seq173 Length=454260 Score = 82.4 bits (90), Expect = 8e-11 Identities = 119/167 (71%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 |||| ||| ||| | ||||| ||||| || ||||||||||| |||||||| | Sbjct 394630 GGTGCTCACCACATTAACGTCAACGTCCTCAAGCGTGAAACTCTTGAAGATGCTATGGCT 394571 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCT---TT 108538 || || ||||| ||||| | || ||||||||||| || ||||| || ||| || || Sbjct 394570 CACCCAGAAAACTATCCAAACCTTACCATCCGTGTTTCTGGTTACGCTGTTAACTTCGTT 394511 Query 108539 AACTCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTT 108585 || | | ||||||| || || || ||||| || |||||||| Sbjct 394510 AAGT---TAACTCCAGCTCAACAAAAGGAAGTTATTGCCCGTACCTT 394467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541144030677760