Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq193 122 7e-23 seq182 109 5e-19 >seq193 Length=296419 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27017 ATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC 27076 ||| || || || | || || || || || | ||||| |||||||||||||||||||| Sbjct 32654 ATTTCCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTC 32713 Query 27077 GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136 | | || | ||||| | |||||||| || |||| | ||| |||||||| || Sbjct 32714 AGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGG 32773 Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196 || | ||| || ||||| ||||| || | | |||| | |||||| | | ||| Sbjct 32774 TGGAATACCTTCCTTATCTTGAATCTTTGACTTGACGTTTTCAATAGTGTCAGAAGATTC 32833 Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| ||| |||| ||| || || | |||||| ||||| ||||||||| Sbjct 32834 AACTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCATA 32885 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| |||||||||||||||||||| | | || | Sbjct 33126 CGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGAGTACGTCCA 33185 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| | ||| |||||||| || || | ||| || ||| Sbjct 33186 TCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTA 33245 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | |||| | |||||| | | ||||||||||| ||| ||| Sbjct 33246 TCTTGAATCTTTGACTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATA 33305 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || | ||| || || || ||||||||| Sbjct 33306 GTTTTACCAGTTAAAGTCTTTACGAAAATTTGCATA 33341 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | || || ||||||||||||||||| || | | || | Sbjct 32898 CGTAAGACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTACGTCCA 32957 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| | ||| |||||||| || || | ||| || ||| Sbjct 32958 TCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTA 33017 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | | |||| | |||||| | | ||||||||||| ||| ||| Sbjct 33018 TCTTGAATCTTTGACTTGACGTTTTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATA 33077 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || | ||| || || || ||||||||| Sbjct 33078 GTTTTACCAGTTAAAGTCTTTACGAAAATTTGCATA 33113 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | || || |||||||||||||||||||| | | || | Sbjct 33354 CGTAAGACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAGTCAGAAAGAGTACGTCCA 33413 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| | ||| |||||||| || || | ||| || ||| Sbjct 33414 TCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTA 33473 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | |||| | |||||| | | ||||||||||| ||| ||| Sbjct 33474 TCTTGAATCTTTGACTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATA 33533 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || | ||| || || || ||||||||| Sbjct 33534 GTTTTACCAGTTAAAGTCTTTACGAAAATTTGCATA 33569 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | || || |||||||||||||||||||| | | || | Sbjct 33582 CGTAAGACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAGTCAGAAAGAGTACGTCCA 33641 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || ||||| || |||| | ||| |||||||| || || | ||| || ||| Sbjct 33642 TCTTCTAATTGCTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTA 33701 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | | |||| | |||||| | | ||||||||||| ||| ||| Sbjct 33702 TCTTGAATCTTTGACTTGACGTTTTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATA 33761 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || || | ||| || || || |||||||| Sbjct 33762 GTTTTACCAGTTAAAGTCTTTACGAAAATTTGCAT 33796 >seq182 Length=390966 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || |||||||| | | | || | ||||| | || |||||| Sbjct 118212 GTAGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTACGACCATCTTCTAATTGCTTACCG 118271 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || ||||| ||||| || || || | ||| || ||||| |||||| ||| Sbjct 118272 GCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTAGCTTTG 118331 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | |||||| | || |||||| || || || || | || ||||| || ||| Sbjct 118332 ACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTACCCGTAAGGGTT 118391 Query 27231 TTCACAAAGATTTGCATAGCTGCTAAAAATTTATTAAA 27268 || || ||||||||||| | ||| |||| |||||| Sbjct 118392 TTGACGAAGATTTGCATCTCAACTACTAATTAATTAAA 118429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933198497984