Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq158 131 8e-26 >seq158 Length=610027 Score = 131 bits (144), Expect = 8e-26 Identities = 722/1127 (64%), Gaps = 56/1127 (5%) Strand=Plus/Plus Query 64883 GTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGT 64942 |||||| | ||||| |||||||| | || ||||| || | || ||| || | ||| || Sbjct 600279 GTACTATAACCTGTACCAATACCTTCTGCACCATTAATAAGAACCATAGGTAAAATGGGA 600338 Query 64943 GCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAA-ATGGCATC 65001 ||| | | || |||| || |||||||||||| ||||| ||||| || ||| Sbjct 600339 ATATACCATTTTGGTTCAATCATTTGACCATCATCATTTAAATA-TTCAATGATATTATC 600397 Query 65002 ATCCTCTTT-TGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTT 65060 ||| ||| | |||| || | | || | |||| |||||||| ||||||| | Sbjct 600398 ATCTGATTTCTTGAAAATTA-ATCTAGCAACTTTAGCTAATTGAGTGAAAATATAACGAG 600456 Query 65061 CGGATGCGTGGTCTTGTCCAGTTCGT---CGTGTTCCAAACTGACCATTTGGCATTAATA 65117 | || || | ||| | || ||||| || || ||||||||||| | ||| | Sbjct 600457 CACTAGCAGCATCCTTACCACCTTGTAAACGTGTACCGAATTGACCATTTGGAACTAACA 600516 Query 65118 AATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAAC 65177 | || ||| || ||||| ||||| ||||| | | ||| || | | || Sbjct 600517 ATGGAACATTATTACTACCAACAAAATCTTGAGCTAAATTAACAATAGCAAGAGAAAGAC 600576 Query 65178 TCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTT 65237 | |||||| ||||| || ||| |||||||| | ||| ||| ||| ||| ||||| | Sbjct 600577 TTTGTTCACCATGATGGTAGGCTGTATGTTCAGCAATATAACCAGTAAGTTGGGCAACCT 600636 Query 65238 TTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTT 65297 | ||||| | |||||||| |||| || | |||| ||||| | | || | || Sbjct 600637 TAATTTCATTGGTTAAATTTCTTTTGAAACAACTGTACATAATTTTTCTTTGACCAGGTT 600696 Query 65298 TCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGA 65357 | || ||||| | ||| ||||| | | ||| | ||||| || || | Sbjct 600697 TAAAACCATCAACTAAGGATGGAATAGAACGAATAACATCTGCCATAGAGAATTGAATTA 600756 Query 65358 ATTCTTTGTTAATAAATTCTTCATATGAAACACTCGTATTATCTG---TATTCAAATAAC 65414 ||||||| ||||||||||| | | |||| || | | | | | | ||| || |||| Sbjct 600757 ATTCTTTATTAATAAATTCATTA-ATGA--CAATTTTGTCAACAGAGTTATCCATATAAA 600813 Query 65415 TATCGCGATTATATTTTTCTAACCATTCTTTTCTATCACTTGAGCGTTTTTATTAAATAT 65474 |||| | |||| | || |||||| || ||||| | | | ||| || || || | | Sbjct 600814 TATCTGGGGTATAATCTTTTAACCAATCCTTTCTTTTA--TCAGCATTCTTTTTTGAGAA 600871 Query 65475 TAAATCAATGGTCTCATCACTTTCTTTGCCTGTATGTTCAAATCCA----ACAATTTTCT 65530 | | || ||| || | ||||| | | | | ||||||| | || ||| ||| | Sbjct 600872 TG---CCATA-TCTAATAATTTTCTAT-CATCT-TGTTCAATTTCACTAAACACTTTACA 600925 Query 65531 TTTGTTTAAAATATTCACGAAAT--TCTTTTCCTG---------TGCTTGTTCCAAGACC 65579 | | | |||| ||||| ||||| || | ||||| || | ||| Sbjct 600926 ATGATGTTGCATATCTGAGAAATATTCTTTAGCTTCAGCAGCACTACTTGTACCCAAACC 600985 Query 65580 TTTATAATATTTGATTTTCCAAGAATTCACGTTTATACT-TCCT--TTCCATTCATTGTA 65636 ||||| ||||| ||||||||| || | | || | |||| |||||| | || Sbjct 600986 CTTATAGTATTTAATTTTCCAACCTTTACCATCATTATTATCCTCCTTCCATCTTTCATA 601045 Query 65637 TTCACCTTCATTGTAAAAGACAATGGTTTGATTACCCCTATGTG---CCTTTAAAATCGG 65693 ||| | | | || || ||||| | || | || | |||| ||| || Sbjct 601046 TTCTGGTAGAGTATAGAATGAAATGGAAGCTCTTCCTTTTCTTGTAACTTTTACAATTGG 601105 Query 65694 TGTATTCATAAACCC-AATAAA--TCCAGGTATCTGCAAAAGACCCGACCACTGTGTGTG 65750 |||| ||||| | |||||| ||| ||||||| || | || | ||| | Sbjct 601106 TGTA---ATAAATTCTAATAAAAATCCTGGTATCTTTAATAAACTTGGCCAAAAATGATC 601162 Query 65751 AAACAAATTAATACACAACCCTTTAATATGATGACCATCCAAATCCGCGTCTGTCATAAT 65810 || |||||||| |||| || ||||| ||| ||||||| ||| || ||||| || Sbjct 601163 TAAGAAATTAATTAACAATCCCTTAATGTGAGAACCATCCGTATCTTGATCCGTCATGAT 601222 Query 65811 AAGAACACGACCATATCTCAAATCATTTGTATCACTGTATTCACG--ACCAGTTTCCAAA 65868 | || | | |||||||| ||| || ||||| ||||| ||| |||| || ||| Sbjct 601223 CATAATATGTCCATATCTTAAACTATCTGTATT--TGTATACACTTTACCATGTTGTAAA 601280 Query 65869 CCAAGTAtttttttAATTTCAGCAATTTCCTTGTTTTCACTAATCTTTTTGATGTTTT-C 65927 ||||| |||| ||||||| || |||||| || || |||| ||| |||| | Sbjct 601281 CCAAGAATTTGTTTAATTGCACTAATTTCTGCATTATCCATAATAGATTT-ATGTGAGGC 601339 Query 65928 ACCACGCACATTTAATATTTTCCC-CTTCATTGGATATACACCATAA 65973 | |||| |||||||| ||||| || | | || ||| ||||||||||| Sbjct 601340 ATCACGAACATTTAACATTTTACCACGTAATGGGA-ATACACCATAA 601385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679333614800