Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq112 105 4e-18 seq135 95.1 8e-15 >seq112 Length=1961624 Score = 105 bits (116), Expect = 4e-18 Identities = 137/187 (73%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 ||||||||||||| || || ||||| |||| | |||||| | |||||||||||| || | Sbjct 1853793 CCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGTTGTCTTCTAATTGTTTACCGGCGAAGA 1853734 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT- 34635 ||||||| |||||||| || || | || ||||| ||| ||||| | | ||||| | Sbjct 1853733 TTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTTTCTTGAATCTTGT-TCTTAACATTG 1853675 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 | ||| |||| ||| || || | |||||| || || || || | ||||| || Sbjct 1853674 ACAATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACG 1853615 Query 34696 AAAATCT 34702 ||||||| Sbjct 1853614 AAAATCT 1853608 >seq135 Length=816381 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||||||| |||||||||||||| ||||| ||||| || || | ||||| | ||| Sbjct 3775 ATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTG 3716 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 ||||| || || |||||||| ||||| || || || | || ||||| ||| ||||| Sbjct 3715 CTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTT 3656 Query 34623 TTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || | | ||| || || || ||||| | ||| || || ||||| || Sbjct 3655 AGCCTTGACATTTTCAATAGTATCAGATGATTCAACTTCTAAGGTAATGGTCTTACCTGT 3596 Query 34683 TAACGTTTTCACAAAAATCT 34702 | ||||| |||||||||| Sbjct 3595 AAGAGTTTTAACAAAAATCT 3576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728710102056