Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq135 145 7e-30 seq112 123 2e-23 >seq135 Length=816381 Score = 145 bits (160), Expect = 7e-30 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 26992 AGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACT 27051 |||| ||||| |||||||| || || ||| | ||||| | ||||| ||| | || || Sbjct 3576 AGATTTTTGTTAAAACTCTTACAGGTAAGACCATTACCTTAGAAGTTGAATCATCTGATA 3635 Query 27052 CGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGC 27111 | ||||| | ||||| || |||||||| || ||||| || ||||| |||||||| | Sbjct 3636 CTATTGAAAATGTCAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAAC 3695 Query 27112 GTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTC 27171 ||||||| | ||| || || ||||| ||||| | || |||| ||||||||||||| Sbjct 3696 GTTTAATCTTCGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTC 3755 Query 27172 AAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||| || || | ||| | ||| | ||||| || ||||| Sbjct 3756 AAAAGGAATCCACTCTCCATCTTGTTCTTCGTTTACGTGGTGG 3798 >seq112 Length=1961624 Score = 123 bits (136), Expect = 2e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 26992 AGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACT 27051 |||| || || ||||| || || || ||| |||| || ||||| || || | |||||| Sbjct 1853608 AGATTTTCGTCAAAACCCTTACTGGAAAGACTATAACCCTTGAGGTTGAGTCTTCCGACA 1853667 Query 27052 CGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGC 27111 |||| | || || | || |||||||| || ||||| || ||||| || ||||| | Sbjct 1853668 GTATTGTCAATGTTAAGAACAAGATTCAAGAAAAGGAAGGTATTCCACCAGACCAACAAC 1853727 Query 27112 GTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTC 27171 ||||||| | |||||| |||||||| ||||||| || |||| || |||||||||| Sbjct 1853728 GTTTAATCTTCGCCGGTAAACAATTAGAAGACAACAGAACTCTTTCTGACTACAACATTC 1853787 Query 27172 AAAAGG 27177 |||||| Sbjct 1853788 AAAAGG 1853793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917138736640