Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_028927.1 Length=167298 Score E Sequences producing significant alignments: (Bits) Value seq154 87.8 2e-12 seq57 84.2 2e-11 seq173 82.4 8e-11 >seq154 Length=675934 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 7/170 (4%) Strand=Plus/Plus Query 131516 AAGGTACGAGCAATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTT---AAAGCGAACT 131572 ||||||||||||||||| || ||||||| ||||| | | || ||| || Sbjct 318349 AAGGTACGAGCAATAACTTCTTTTTGCTGTTGTGGAGTTA---ATTTTACAAAATTGACA 318405 Query 131573 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 131632 ||||||||||| ||||| || || || | ||||| ||||| ||||| | |||||| Sbjct 318406 GCATAACCGGAAACACGAATAGTAAGGTTTGGATAATTTTCTGGATGAACCATAGCATCT 318465 Query 131633 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGA-CCACCTT 131681 || || |||||||| ||||| |||||||| || || ||| || |||| Sbjct 318466 TCTAGGGTTTCACGTTTAAGAACATTAACGTTAAGATGATGAGCCCCCTT 318515 >seq57 Length=911805 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 131516 AAGGTACGAGCAATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACTGCA 131575 ||||||||||||||||| || || || | ||||||| | |||| ||| ||| Sbjct 6075 AAGGTACGAGCAATAACTTCCTTTTGTTGAGCTGGAGTCAACTTGACAAAGTTAACAGCA 6134 Query 131576 TAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCTTCC 131635 ||||| || ||||| || || || | ||||| ||||| ||||| | |||||||| Sbjct 6135 TAACCAGAAACACGAATAGTAAGATTTGGATAGTTTTCTGGATGAGCCATAGCATCTTCT 6194 Query 131636 AGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 131679 | |||||||| ||||| ||||| || || || ||| |||| Sbjct 6195 AAGGTTTCACGCTTAAGAACATTAACATTAAGATGATGAGCACC 6238 >seq173 Length=454260 Score = 82.4 bits (90), Expect = 8e-11 Identities = 119/167 (71%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 131516 AAGGTACGAGCAATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAA---AGCGAACT 131572 |||||||| |||||||| || || || | ||||| | | |||| || ||| Sbjct 394467 AAGGTACGGGCAATAACTTCCTTTTGTTGAGCTGGAGTTA---ACTTAACGAAGTTAACA 394523 Query 131573 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 131632 || ||||| || ||||||||||| || | ||||| ||||| || || | |||||| Sbjct 394524 GCGTAACCAGAAACACGGATGGTAAGGTTTGGATAGTTTTCTGGGTGAGCCATAGCATCT 394583 Query 131633 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 131679 || ||||||||||| || ||||| ||||| | ||| ||| |||| Sbjct 394584 TCAAGAGTTTCACGCTTGAGGACGTTGACGTTAATGTGGTGAGCACC 394630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535224047845760