Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20]
232 sequences; 56,455,805 total letters
Query= NC_031090.1
Length=169621
Score E
Sequences producing significant alignments: (Bits) Value
seq154 86.0 7e-12
seq57 84.2 2e-11
>seq154
Length=675934
Score = 86.0 bits (94), Expect = 7e-12
Identities = 117/162 (72%), Gaps = 6/162 (4%)
Strand=Plus/Minus
Query 142546 TCAACACCTGAACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCC 142605
||| || || |||||||||||||| |||||||| || |||||||| | |||||
Sbjct 318507 TCATCATCTTAACGTTAATGTTCTTAAACGTGAAACCCTAGAAGATGCTATGGTTCATCC 318448
Query 142606 AGAAAAATATCCGCAGTTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT---AACTC 142662
|||||| ||||| | | || || ||||| ||||||||||| || ||| || |
Sbjct 318447 AGAAAATTATCCAAACCTTACTATTCGTGTTTCCGGTTATGCTGTCAATTTTGTAAAAT- 318389
Query 142663 TCTGACTCCGGAACAGCAGCGTGACGTTATCGCTCGTACCTT 142704
| ||||| ||||||| || ||||| |||||||||||
Sbjct 318388 --TAACTCCACAACAGCAAAAAGAAGTTATTGCTCGTACCTT 318349
>seq57
Length=911805
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 142541 GGTGGTCAACACCTGAACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 142600
|||| ||| || || || ||||||||||| |||||||| | |||||||| |
Sbjct 6238 GGTGCTCATCATCTTAATGTTAATGTTCTTAAGCGTGAAACCTTAGAAGATGCTATGGCT 6179
Query 142601 CATCCAGAAAAATATCCGCAGTTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 142660
||||||||||| ||||| | | || || ||||| || |||||||| ||| |||| |
Sbjct 6178 CATCCAGAAAACTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTTGTC 6119
Query 142661 TCTCTGACTCCGGAACAGCAGCGTGACGTTATCGCTCGTACCTT 142704
||||||| | || || || ||||| |||||||||||
Sbjct 6118 AAGTTGACTCCAGCTCAACAAAAGGAAGTTATTGCTCGTACCTT 6075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542657626288320
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |