Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20finnis_20[genbank_20GCA_5F002104945.1_202017-04-20] 232 sequences; 56,455,805 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq182 116 3e-21 seq57 107 1e-18 seq112 82.4 5e-11 >seq182 Length=390966 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||||||||||||||||| || | || || | || || Sbjct 118200 ACAAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTACGACCATCTTCT 118259 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| ||||| ||||| | ||| || || |||| || | ||||||||| || Sbjct 118260 AATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGG 118319 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| || | || | || ||||||| |||||| ||||| | ||||| ||||| Sbjct 118320 ATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTA 118379 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| || |||||||||||||| Sbjct 118380 CCCGTAAGGGTTTTGACGAAGATTTGCAT 118408 >seq57 Length=911805 Score = 107 bits (118), Expect = 1e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||||||||||||||| |||| || || | ||| || | ||||| || || |||| Sbjct 75453 CCTTTTGGATGTTGTAGTCGGAAAGAGTACGGTTGTCTTCTAATTGCTTACCAGCGAAGA 75512 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | ||||| || ||||||| || | |||||||||||| ||||| | ||| | | Sbjct 75513 TTAAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCTTGTTCTTTACATTAA 75572 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||| |||||| ||||| ||||| | || || |||||||| || |||||||| || | Sbjct 75573 CAATGCTGTCGGAAGATTCAACCTCAAGGGTGATAGTCTTTCCGGTAAGGGTCTTTACAA 75632 Query 44328 AGAT 44331 | || Sbjct 75633 AAAT 75636 >seq112 Length=1961624 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/186 (70%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||| |||||||| || | ||||| | | ||| || | || || ||||| || Sbjct 1853793 CCTTTTGAATGTTGTAGTCAGAAAGAGTT--CTGTTGTCTTCTAATTGTTTACCGGCGAA 1853736 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| ||||| || || |||| || | |||||||||||| ||||| | ||| | | Sbjct 1853735 GATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTTTCTTGAATCTTGTTCTTAACATT 1853676 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || |||||| || || ||||| | || || |||||||| || ||||| || || Sbjct 1853675 GACAATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGAC 1853616 Query 44326 GAAGAT 44331 ||| || Sbjct 1853615 GAAAAT 1853610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989382127144