Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq187 93.3 4e-14 >seq187 Length=118869 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || ||||| || ||||| ||| | || |||||| || || Sbjct 40963 ATGCAAATCTTCGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTCGAATCCTCC 41022 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | || || | || || || || ||||| | ||||| Sbjct 41023 GACACTATCGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 41082 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| || || || || | || || | || || || ||||||||| Sbjct 41083 CAACGTCTTATCTTTGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 41142 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| ||||| | || || || || || Sbjct 41143 ATCCAAAAGGAATCTACTCTCCACCTTGT 41171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208534962560