Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq151 98.7 8e-16 >seq151 Length=136619 Score = 98.7 bits (108), Expect = 8e-16 Identities = 229/340 (67%), Gaps = 4/340 (1%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| |||||||| || || ||||||| | ||| || | ||||| || || ||| Sbjct 132477 TTTCCTTTATTAACAACTAAGAAAGTATTTTTCAGAGGTGTAGCAGAAGAATTGTTTTGG 132536 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGT-AGAAAAAGGAGTTAAGATTTGGAG 20162 ||||| | || ||| |||| | | || | | ||||||| ||||| |||||| Sbjct 132537 TTTATCAGGGGTGATACAGATTCAAAA-ATATTATCAAAAAAAGGTGTTAAAATTTGGGA 132595 Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGG 20221 | | |||| ||| ||||| | | | | ||| |||||| | | | || || | Sbjct 132596 AGGAAATGGTTCTCGTGAATTTCTTGATAAAATTGG-TTTGACTGAAAGAGAGGAAGGTG 132654 Query 20222 ATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGA 20281 |||| ||||| | ||||| | |||||| | ||||| || || ||||||| || Sbjct 132655 ATTTAGGTCCAATATATGGTTGGCAATGGCGTCATTTCGGTGCAAAATATGTAGATTGTC 132714 Query 20282 ACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAA 20341 | ||| ||||| |||| ||||| ||||||| | | |||| ||| || |||| | Sbjct 132715 ATACAGATTATACTGGAAAAGGAAAAGATCAACTTCGTGATGTAATTGATAAAATTGTTA 132774 Query 20342 CGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAA 20381 || || | ||||||||||||||| | | |||||||| Sbjct 132775 ATAATCCGACTGACAGAAGAATTATTATGTCTGCCTGGAA 132814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399175943468920