Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq579 84.2 2e-11 >seq579 Length=22240 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | |||||||| || | ||||| | || || |||||||| || || ||| Sbjct 1191 TCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAA 1250 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || | || |||||||| | || | ||||||||| || || |||| || | Sbjct 1251 ATAAGACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTAACATTT 1310 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || || || || || | || ||||| || || || ||||| || ||| Sbjct 1311 TCAATAGTATCAGAAGATTCAACTTCAAGAGTGATAGTCTTACCAGTAAGAGTCTTTACA 1370 Query 43099 AAAATTTGCATTTTCTTAATTTTATTTGTA 43128 || ||||||||||| ||| ||||||| || Sbjct 1371 AAGATTTGCATTTT-TTA--TTTATTTTTA 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381361903008048