Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq579 96.9 2e-15 >seq579 Length=22240 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| || ||||| || || || |||||||| || ||||| | ||| |||| Sbjct 941 TAAGACTAAATGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCATC 1000 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 || |||||||| || || || || | ||||| ||||| | || | |||||||||||| Sbjct 1001 TTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 1060 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||| || | ||| ||||| | | || || || | || || || Sbjct 1061 TTGAATTTTGGCTTTAACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTGATAGT 1120 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||||| |||||||| || ||||| |||||||| Sbjct 1121 TTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354770439701088