Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq374 93.3 5e-14 seq38 89.7 6e-13 >seq374 Length=59602 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/167 (73%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 65954 GAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGT--ACG 66011 ||| || || | || || ||| |||||| | ||||||||| | ||| | || || Sbjct 33787 GAAGGTACGGGCAATAACTTCCTTTTGTTGTTGAGGAGTTAA--CTTTACAAAGTTGACA 33730 Query 66012 GCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATTAACGATTGCATCT 66071 || ||||| || ||||| ||||| || | ||||| |||||||||| | | || |||||| Sbjct 33729 GCGTAACCAGAGACACGAATGGTAAGGTTTGGATAGTTTTCTGGATGAGCCATAGCATCT 33670 Query 66072 TCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 66118 || | || | || | |||||| || ||||||||||| ||| |||| Sbjct 33669 TCTAAAGTTTCACGTTTAAGAACGTTAACGTTGAGATGGTGAGCACC 33623 >seq38 Length=269233 Score = 89.7 bits (98), Expect = 6e-13 Identities = 121/167 (72%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 65954 GAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGT--ACG 66011 ||| || || | || || ||| |||||| | |||||||| | ||| | || ||| Sbjct 179918 GAAGGTACGAGCAATAACTTCCTTTTGTTGTTGTGGAGTTAA--CTTTACAAAGTTAACG 179975 Query 66012 GCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATTAACGATTGCATCT 66071 |||||||| |||||||| || || || | ||||| |||||||| | | | || |||||| Sbjct 179976 GCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGGTGAGCCATAGCATCT 180035 Query 66072 TCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 66118 || || || | || | ||||| || ||||| ||||| ||| |||| Sbjct 180036 TCAAGAGTTTCACGCTTGAGAACGTTAACGTTAAGATGGTGAGCACC 180082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555351703981760