Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq579 100 2e-16 >seq579 Length=22240 Score = 100 bits (110), Expect = 2e-16 Identities = 180/262 (69%), Gaps = 1/262 (0%) Strand=Plus/Plus Query 19947 TTTTATTATAAAATTTAAATATATTTTATCATTTTCCTCCTCGTAACCTCAACACCAAAT 20006 ||| |||||| || | | | ||||| | | ||||| || || | | || || |||| Sbjct 893 TTTCATTATATTATGTTATT-TATTTATTTAGTTTCCACCACGAAGACGTAAGACTAAAT 951 Query 20007 GTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTT 20066 | ||||||||||| ||||| ||||||||||| | ||| | |||||| ||||||| Sbjct 952 GAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTT 1011 Query 20067 TGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTT 20126 | || || ||||||| | ||||| || || | |||||||| || |||||| Sbjct 1012 TACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATTTTGG 1071 Query 20127 GTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCA 20186 ||| || | ||| | ||| || ||| ||| | || || ||||| || || | Sbjct 1072 CTTTAACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTGATAGTTTTACCAGTTA 1131 Query 20187 ACGTTTTGACAAAAATTTGCAT 20208 | ||||| ||||| |||||||| Sbjct 1132 AAGTTTTAACAAAGATTTGCAT 1153 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || ||||| | | || || || || |||||||| ||||| ||||||||||| Sbjct 1155 CCACCACGTAAACGAAGAACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAATCAGAA 1214 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || ||||||| | |||||||| || Sbjct 1215 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGGA 1274 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| || ||| || ||| | Sbjct 1275 ATACCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATAGTATCAGAAGATTCAACT 1334 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212 || | || || || || || || | || || ||||| |||||||||||| Sbjct 1335 TCAAGAGTGATAGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCATTTTT 1385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419578731681336