Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq151 123 3e-23 seq603 100 3e-16 >seq151 Length=136619 Score = 123 bits (136), Expect = 3e-23 Identities = 298/440 (68%), Gaps = 27/440 (6%) Strand=Plus/Minus Query 7055 TATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATT 7114 || ||| ||||||||| |||| ||| | ||| | ||| ||| | ||||| || |||| Sbjct 132825 TACCAGCTGGATTCCAGGCAGACATAATAATTCTTCTGTCAGTCGGATTA-TTAACAATT 132767 Query 7115 TTGTTATAATTATTT---GTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAAT 7171 || | | |||| | | | ||||||| | || | || ||||| |||||||||| Sbjct 132766 TTATCA--ATTACATCACGAAGTTGATCTTTTCCTTTTCCAGTATAATCTGTATGACAAT 132709 Query 7172 TTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTT 7231 || ||| || || || ||||| | |||||| | ||||| || |||||||||||||||| Sbjct 132708 CTACATATTTTGCACCGAAATGACGCCATTGCCAACCATATATTGGACCTAAATCACCTT 132649 Query 7232 CTTCACGATGATTAAATCCTAATCGATTTA-AATTAGATT---TTGATCCATAAGCATCC 7287 | || | | | | || || ||| |||| | | ||| || |||| | ||| Sbjct 132648 CCTCTCTTTCAGTCAAACC-AAT---TTTATCAAGAAATTCACGAGAACCATTTCCTTCC 132593 Query 7288 CAAATATGTACAGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCAT 7347 ||||| | ||| |||||||||||| || |||| |||| || | | ||||| Sbjct 132592 CAAATTTTAACACCTTTTTTTGATAATATTTTTGAATCTGTATCACCCCTGATAAACCAA 132533 Query 7348 AAAAGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGG-GAATGT 7406 || | ||||||| ||| || | |||| | | | || || || |||||||| |||| Sbjct 132532 AACAATTCTTCTGCTACACCTCTGAAAAATACTTTCTTAGTTGTTAATAAAGGAAAATGA 132473 Query 7407 ACTT-------AAATCATA-TCTATTCTGTAAACCAAATACTGAAAGAGTACCTGTTCCA 7458 ||| ||| | || | |||| || ||||| | || ||||||||||||| Sbjct 132472 TCTTTTAATGAAAACCTTAGTGGATTCGGT---CCAAAAATTGCTCGAGTACCTGTTCCT 132416 Query 7459 GTTCTATCAATT-TTAAGTC 7477 ||||||||| || |||| || Sbjct 132415 GTTCTATCATTTCTTAACTC 132396 >seq603 Length=19817 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 19354 AATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTAT 19413 ||| || |||| ||||||||||| ||| | || |||||| || || |||||| Sbjct 11403 AATTCCACAAATGGGTGATAAGTTCGCTAGTAGACATGGTCAAAAGGGTACTGTTGGTAT 11462 Query 19414 GATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTAT 19473 || ||||||| ||||||||||| |||||| ||||||| || ||| ||||||| Sbjct 11463 GACTTATCGTACTGAAGATATGCCATTTACTGCTAATGGTATTACACCAGATATTATTAT 11522 Query 19474 TAACCCACATGCTTTTCCAAGTCGAATGAC 19503 |||||||||||| ||||| ||| ||||| Sbjct 11523 TAACCCACATGCCATTCCATCTCGTATGAC 11552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595859665449600