Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq579 95.1 1e-14 seq187 87.8 2e-12 >seq579 Length=22240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 115268 ATTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 ||| | || | || |||||||||||| ||||| || || || || || || || || || Sbjct 1399 ATTAAAAATAAATAAAAAATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACTATCACT 1340 Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387 | ||| || || || ||| ||| | | || ||| |||||| ||||||||| Sbjct 1339 CTTGAAGTTGAATCTTCTGATACTATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAA 1280 Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447 || | || |||||| ||| | ||||||| || || |||||||||||||||| Sbjct 1279 GGTATTCCACCTGATCAACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGT 1220 Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTAC 115482 || | | ||||| ||||| ||||| || ||||| Sbjct 1219 ACTCTTTCTGATTACAACATCCAAAAGGAATCTAC 1185 Score = 86.0 bits (94), Expect = 5e-12 Identities = 172/254 (68%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| | || || ||||| || || | ||| || || Sbjct 1153 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACTATCACTTTAGAAGTAGAATCTTCT 1094 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | || ||| |||||| ||||||||||| | || || || Sbjct 1093 GATACCATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 1034 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| || || |||||||||||||||| || | | ||||| ||| Sbjct 1033 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 974 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAACCACAATAA 115525 |||||||| || ||||| | ||| | || || | | || || ||||| | ||||| Sbjct 973 ATTCAAAAGGAATCTACACTTCATTTAGTCTTACGTCTTCGTGGTGGAAA--CTAAATAA 916 Query 115526 AAAATTAATATTAT 115539 | || ||| || || Sbjct 915 ATAAATAACATAAT 902 >seq187 Length=118869 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || |||||||| || ||||| || ||||||||| | || || ||| | Sbjct 40963 ATGCAAATCTTCGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTCGAATCCTCC 41022 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| | | | | || ||| || || ||||| ||||| |||| || || Sbjct 41023 GACACTATCGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 41082 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||| | ||| || || ||||||||||||| || | | || || ||| Sbjct 41083 CAACGTCTTATCTTTGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 41142 Query 115466 ATTCAAAAAGAGTCTACT 115483 || ||||| || |||||| Sbjct 41143 ATCCAAAAGGAATCTACT 41160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425335415494720