Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq579 161 9e-35 seq187 111 1e-19 >seq579 Length=22240 Score = 161 bits (178), Expect = 9e-35 Identities = 179/236 (76%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || |||||| | ||||| | ||||| || || ||| Sbjct 1153 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACTATCACTTTAGAAGTAGAATCTTCT 1094 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| ||| || |||||||| |||||||| ||| Sbjct 1093 GATACCATTGAA--AATGTTAAAGCCAAAATTCAA-GATAAAGAAGGTATTCCACCAGAC 1037 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || ||||||| || || |||||||||||||||| ||| ||| | |||||| Sbjct 1036 CAACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTAC 977 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || |||||||| ||||| || || |||||||| || | || | || ||||| || Sbjct 976 AACATTCAAAAGGAATCTACACTTCATTTAGTCTTACGTCTTCGTGGTGGAAACTA 921 Score = 158 bits (174), Expect = 1e-33 Identities = 168/219 (77%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || ||||||||| |||||||||||| | || ||||| | ||||| | ||||| || || Sbjct 1385 AAAAATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACTATCACTCTTGAAGTTGAATC 1326 Query 25055 GTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 ||||| ||||| || | || |||| |||| ||| || |||||||| |||||||| Sbjct 1325 TTCTGATACTATTGAA--AATGTTAAAGCCAAAATTCAA-GATAAAGAAGGTATTCCACC 1269 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||| ||||| || ||||||| || || |||||||||||||||| ||| ||| | || Sbjct 1268 TGATCAACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGA 1209 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || ||||| ||||| || || || ||||| || Sbjct 1208 TTACAACATCCAAAAGGAATCTACCCTTCACTTAGTTCT 1170 >seq187 Length=118869 Score = 111 bits (122), Expect = 1e-19 Identities = 150/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | || ||||| |||| || | || || || || || Sbjct 40963 ATGCAAATCTTCGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTCGAATCCTCC 41022 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| |||| || | || || || ||||| || ||||| || Sbjct 41023 GACACTATCGAAAATGTCA---AAGCTAAGATCCAA-GATAAGGAAGGTATCCCACCAGA 41078 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || |||| |||||||| || ||||||||||||| ||| ||| | || || Sbjct 41079 CCAACAACGTCTTATCTTTGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTA 41138 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || ||||| ||||| || || || Sbjct 41139 CAACATCCAAAAGGAATCTACTCTCCA 41165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433319254357640